Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1329 ATGCCGGTGTTGCGTAGTGAAATCCGTAAGGGTCGATCAAGAGCGAAGAATAAAGAGGACAATCAGCAATTGAATAATCAGAATCAGAATCAGAATCCGGTGGTTGAAGTGGAAGCGATTGCAACTAGAACAAGAAGGCGGCGTGCAGCGGCGGCAGCAGCAGCGGCAGTGCCGGATAACGAGAAACAGAAGCAACAACAGGTTGTGGTCAATGCGAAAGTCGTTGTATCAGAGAAAGAGGAGGAAAAGTTAGGTGGTAAGGAAAAGAAGGAGGAAGAGGGAGAGGAGAAAAAGATGAATGATGTTGATAGTGGAGGTAAAGCCAATGCTGGTGAAGATGAAGGGAATGCTCCTCCTCTTCCTGAGAAGGTTCAAGTTGGTGGTTCCCCTTGGTATAAATTAGAAAGAAAACTTGGCAAGGGTGGATTTGGGCAAGTATATGTTGGTCGACGTGTAACTGTTGCAAATTTGAGTGAGACAACTGGACCTGGGGCTGTAGAGGTCGCGTTAAAACTTGAGCACAAAACTAGTAAAGGATGTAACTATGGACCACCCTATGAGTGGCAAGTGTACAATACTCTTGGTGGCAGTCATGGTGTGCCACAAGTACATTACAAGGGAAGGCAAGGTGACTACTATATCATGGTTATGGATATTCTTGGACCTAGTTTGTGGGATGTTTGGAATAATAACAATCACATCATGTCCACTGAAATGGTTGCTTGTATTGCCATTGAAGCAATATCCATCTTGGAGAAGATGCATTCCAGAGGATATGTGCATGGGGATGTGAAGCCTGAAAATTTTCTACTTGGTCCTCCTGGTACACCTGATGAGAAAAAATTGTTCCTTGTAGATCTTGGATTAGCTGTTAAATGGCGGGATAGTACAACAGGTTTGCATGTAGAATATGACCAAAGGCCAGATGTTTTTAGGGGCACTGTTCGTTATGCTAGTGTGCATGCACATCTAGGGAGAACCGGAAGCAGGAGGGATGATTTGGAATCTCTTGCTTATACACTTATTTTTCTTCTTCGAGGTCGTCTTCCTTGGCAAGGATACCAGGGAGACAACAAAGGATTTCTTGTTTGCAAGAAGAAGATGGGAACATCTCCAGAGATGCTATGTTCCTTTTGCCCTCATCCTTTTAGACAGTTTGTGGAACATGTGGTGAACTTAAAGTTTGATGAAGAGCCTAACTATGCAAAATACATTTCTCTATTTGATGGGATTGTTGGTCCCAATCCAGATATTAGGCCACTTAATACAGAAGGTGCACAAAAGCTTATTGGGCATAAGAGAGGCCGGTTGGCAATGGAAGAAGATGACGAACAAGCAAAAAAGAAGATTCGTTTGGGTTTGCCAGCAACCCAGTGGATAAGTGTTTATAATGCACGTAGACCGATGAAACAAAGATATCACTACAATGTGTCAGATCAAAGGCTATCTCAGCACATTGAGAAAGGTAATGAGGATGGCTTATTTATTAGCAGTGTTGCTGCAGCTCAGGACCTTTGGGCCATAATCATGGATGCCGGGACAGGTTTCACTTCTCAAGTTTACGAAGTTTCCAACCAATTTCTCCATAAGGAATGGATCATGGAACAGTGGGAAAAAAATTACTACATCAGTGCCATTGCTGGAACTTCAAATGGGAGCTCACTGGTAGTAATGTCTAAGGGCACTCAGTATTTGCAGCAATCTTACAAAGTCGGTGAGTCATTTCCTTTCAAGTGGATTAACAAAAAATGGAAGGAGGGCTTTTATGTGACTGCAATGGCGACCTCGGCGTCTAGATGGGGAATAGTTATGTCTCGTGGTGCTGGATTTTCTGACCAGGTGGTTGAGCTAGATTTTCTGTATCCTAGTGAAGGGATTCACAAGCGGTGGGATTGTGGATATCGAATCACAGCGACTGCCGCAACTCCGGATCAAGCTGCTTTTGTCCTGAGTGTGCCAAGGAGGAGGCCCACAGATGAAACTCAAGAAACTCTCAGGACTTCTGCTTTTCCTAGTACACATGTCAAGGAAAAGTGGGCAAAGAATCTCTACATTGCTTCTGTTTGCTATGGACGTACAGTTTCTTGA 2088 0.4382 MPVLRSEIRKGRSRAKNKEDNQQLNNQNQNQNPVVEVEAIATRTRRRRAAAAAAAAVPDNEKQKQQQVVVNAKVVVSEKEEEKLGGKEKKEEEGEEKKMNDVDSGGKANAGEDEGNAPPLPEKVQVGGSPWYKLERKLGKGGFGQVYVGRRVTVANLSETTGPGAVEVALKLEHKTSKGCNYGPPYEWQVYNTLGGSHGVPQVHYKGRQGDYYIMVMDILGPSLWDVWNNNNHIMSTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLAVKWRDSTTGLHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGDNKGFLVCKKKMGTSPEMLCSFCPHPFRQFVEHVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPLNTEGAQKLIGHKRGRLAMEEDDEQAKKKIRLGLPATQWISVYNARRPMKQRYHYNVSDQRLSQHIEKGNEDGLFISSVAAAQDLWAIIMDAGTGFTSQVYEVSNQFLHKEWIMEQWEKNYYISAIAGTSNGSSLVVMSKGTQYLQQSYKVGESFPFKWINKKWKEGFYVTAMATSASRWGIVMSRGAGFSDQVVELDFLYPSEGIHKRWDCGYRITATAATPDQAAFVLSVPRRRPTDETQETLRTSAFPSTHVKEKWAKNLYIASVCYGRTVS 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1329 695 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Lal1g1329 695 MobiDBLite consensus disorder prediction 75 103 - -
Lal1g1329 695 SMART serkin_6 132 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g1329 695 Pfam Protein kinase domain 132 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g1329 695 PANTHER CASEIN KINASE-RELATED 94 668 - -
Lal1g1329 695 SUPERFAMILY Protein kinase-like (PK-like) 132 412 IPR011009 -
Lal1g1329 695 PANTHER - 94 668 - -
Lal1g1329 695 ProSitePatterns Protein kinases ATP-binding region signature. 138 171 IPR017441 GO:0005524
Lal1g1329 695 Coils Coil 12 32 - -
Lal1g1329 695 MobiDBLite consensus disorder prediction 1 127 - -
Lal1g1329 695 CDD STKc_CK1 132 408 - -
Lal1g1329 695 MobiDBLite consensus disorder prediction 20 37 - -
Lal1g1329 695 ProSiteProfiles Protein kinase domain profile. 132 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g1329 695 Gene3D Transferase(Phosphotransferase) domain 1 95 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1329 Lal-Chr1 15058055 15064344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1329 93 356 AGC Kinase Gene Family AT3G08730 24.060 1.67e-09 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Lal1g1329 Pkinase 1.2e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1329 - - gmx:100800869 1129.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1329 1 15058055 15064344 Lal20g1151 20 15956411 15963161 ECH
Lal1g1329 1 15058055 15064344 Lal1g1329 1 15058055 15064344 ECH
Lal20g1151 20 15956411 15963161 Lal1g1329 1 15058055 15064344 LSH