Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1277 ATGAGCGTGGTTGGATTTGATTTTGGTAATGAAAGCTGCATTGTTGCGGTTGCAAGGCAGAGAGGCATTGATGTTGTTCTCAATGATGAGTCCACGCGTGAAACCCCTGCTATTGTATGCTTTGGTGACAAGCAGCGCTTCATCGGCACTGCTGGGGCTGCTACCACTATGATGAACCCCAAGAATTCCATCTCACAGATTAAGAGGCTAATTGGTAAACAATTTTCTGATCCCGGATTGCAGCGGGATCTCAGGTCATTGCCCTTTCATGTTACTGAAGGCCCTGATGGATATCCATTGATTCATGCACGCTACTTGGGTGAAGCTAAATCATTTACCCCAACACAAGTGTTCGGAATGATGTTGTCAAATCTTAAAGAAATCGCCGAGAAGAATCTTAATGCTGCTGTTGTTGATTGTTGCATTGGAATCCCAGTTTATTTTACTGATCTTGAGAGGAGGGCAGTCTTGGATGCTGCCACGATTGCTGGTTTACGCCCACTTCACCTCATTCATGAAACTACGGCGACTGCCTTGGCCTATGGGATTTACAAGACAGATCTTCATGAAACTGATCAGCTGAATGTTGCCTTTGTTGACATTGGACATGCAAGCATGCAAGTGTGCATCACTGGATTCAAAAAGGGGCAGCTTAAAATACTAGCTCATTCATATGATCGGTCTTTGGGTGGAAGGGATTTTGATGAGGTTTTGTTCCATTACTTTGCTGCAAAATTTAAGGAGGAGTACAAGATTGATGTTTTCCAGAATGCCAGGGCTTCTCTAAGGCTCAGAGCTGCTTGTGAGAAGCTAAAGAAGGTGCTTAGTGCAAATCCTGAGGCACCTCTGAACATCGAGTGCTTAATGGATGAGAAGGATGTCAGGAGCTTCATCAAACGTGATGACTTTGAGCGACAAAGTCTTCCAATTTTGGAACGTGTGAAGGGACCTTTGGAGAAGGCACTTGCTGAAGCAGGCCTTACGGTTGAAGATGTACACATGGTTGAGATTGTTGGTTCAGGTTCTCGTGTACCAGCTATAAATAGAATACTGACTGAGTTTTTCAGAAAGGACCCTAGGCGGACAATGAATGCTAGTGAATGCGTTGCTAGGGGTTGTGCCTTGCAGTGTGCAATTCTTAGTCCAACATTTAGAGTACGAGACTTTCAGGTCAACGAAAGCCTACCATTCTCTATTTCTCTTTCATGGAAAGGTTCTGGTCCGGATGCACAAAATAGTGGATCAGATAATCAGCTAAGTACAGTTGTTTTCCCCAAAGGCAATCCCATACCAAGTATCAAGGCACTGACATTCTACAGGTCAGGAACATTTTCTGTTGATGTACAATATGGTGATGTGAGTGGGCTGCAAGCTTCTAAGATTAGCACATATACGATTGGTCCTTTCCAAAGCACGAAAAGTGAAAGGGCAAAGGTTAAGGTTAAAGTTCGATTGAATTTGCATGGAATTGTATCTGTGGACTTGGCAACTATGTTGGAAGAGGAAGAAGTCGAGGTGCCAGTTTCCAAAGATCCAGCTGCAGAAAATACCAAGATGGACACTGATGGAGTTCCTACAAATGCTGCTGTCCCTCCAACCTTCAATGACAGTGATGTTAACATGCAAGATGCAAAGGCCAGTGATGATACCTCTGGGGTGGAAAATGGTACCTCTGAGAGCGGAGATAAGCCTGTGCAAACGGATTCTGATACCAAGGTTCAGGCTCCCAAGAAAAAGGTTAAGAAAACGAACATTCCAATTGCAGAGTTAGTTTATGGTGCAATGGTACCTGTGGATGTTCAGAAAGCTGTTGAGAAAGAGTTTGAAATGGCTTTGCAAGATCGTGTGATGGAAGAAACCAAGGACAAGAAAAATGCAGTTGAGGCTTATGTTTATGACATGAGAAACAAGCTTAATGACAAATACGAACAGTTTGTGACTGTTCCAGAGAAGGAAGGTTTTATTGCCAAACTTCAGGAGGTGGAAGACTGGCTATATGAGGATGGCGAAGATGAAACTAAAGGTGTATATGTTGCCAAACTTGAAGAACTAAAAAGGCAAGGTGATCCAGTTGAAGAGCGTTATAAAGAATATACGGAGAGGGGTACAGTGATCGATCAGTTCATCTATTGTATTAATAGTTACAGAGAAGCCGCATTGTCAACTGATCCCAAATTTGATCATATTGACATCAACGAGAAACAGAAGGTCGTAACTGAATGCGTTGAAGCTGAAAACTGGCTTAGGGAGAAGAAGCAGCAACAGGACTCACTTCCAAAACATGTCAACCCTGTACTCTTGTCTGCTGATATAAGAAAGAAAGCTGAGGCTGTTGATAGGTTCTGTAAGCCGATTATGACGAAACCAAAGCCAGCCAAGCCAGTTACTCCACCAACACCAGCAACCCCACCACCTCAGGGTGGTGATGCTAATGGGAATGCAGGTGCCGCCGGTAGTGAAGTCCCACCGCAATCTACTGAACCAATGGAGACTGATAAGTAA 2502 0.438 MSVVGFDFGNESCIVAVARQRGIDVVLNDESTRETPAIVCFGDKQRFIGTAGAATTMMNPKNSISQIKRLIGKQFSDPGLQRDLRSLPFHVTEGPDGYPLIHARYLGEAKSFTPTQVFGMMLSNLKEIAEKNLNAAVVDCCIGIPVYFTDLERRAVLDAATIAGLRPLHLIHETTATALAYGIYKTDLHETDQLNVAFVDIGHASMQVCITGFKKGQLKILAHSYDRSLGGRDFDEVLFHYFAAKFKEEYKIDVFQNARASLRLRAACEKLKKVLSANPEAPLNIECLMDEKDVRSFIKRDDFERQSLPILERVKGPLEKALAEAGLTVEDVHMVEIVGSGSRVPAINRILTEFFRKDPRRTMNASECVARGCALQCAILSPTFRVRDFQVNESLPFSISLSWKGSGPDAQNSGSDNQLSTVVFPKGNPIPSIKALTFYRSGTFSVDVQYGDVSGLQASKISTYTIGPFQSTKSERAKVKVKVRLNLHGIVSVDLATMLEEEEVEVPVSKDPAAENTKMDTDGVPTNAAVPPTFNDSDVNMQDAKASDDTSGVENGTSESGDKPVQTDSDTKVQAPKKKVKKTNIPIAELVYGAMVPVDVQKAVEKEFEMALQDRVMEETKDKKNAVEAYVYDMRNKLNDKYEQFVTVPEKEGFIAKLQEVEDWLYEDGEDETKGVYVAKLEELKRQGDPVEERYKEYTERGTVIDQFIYCINSYREAALSTDPKFDHIDINEKQKVVTECVEAENWLREKKQQQDSLPKHVNPVLLSADIRKKAEAVDRFCKPIMTKPKPAKPVTPPTPATPPPQGGDANGNAGAAGSEVPPQSTEPMETDK 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1277 833 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 592 IPR029047 -
Lal1g1277 833 PANTHER HSC70CB, ISOFORM G-RELATED 1 833 - -
Lal1g1277 833 MobiDBLite consensus disorder prediction 790 805 - -
Lal1g1277 833 MobiDBLite consensus disorder prediction 783 833 - -
Lal1g1277 833 Gene3D - 597 705 IPR029048 -
Lal1g1277 833 MobiDBLite consensus disorder prediction 505 577 - -
Lal1g1277 833 CDD HSPA4_like_NDB 2 381 - -
Lal1g1277 833 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 717 795 IPR029048 -
Lal1g1277 833 Gene3D - 186 360 - -
Lal1g1277 833 Coils Coil 681 701 - -
Lal1g1277 833 Gene3D Actin; Chain A, domain 4 230 313 - -
Lal1g1277 833 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Lal1g1277 833 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 598 695 IPR029048 -
Lal1g1277 833 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 628 IPR029047 -
Lal1g1277 833 PANTHER HEAT SHOCK 70 KDA PROTEIN 14 1 833 - -
Lal1g1277 833 Gene3D - 38 113 - -
Lal1g1277 833 Gene3D - 5 374 - -
Lal1g1277 833 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Lal1g1277 833 PRINTS 70kDa heat shock protein signature 2 15 - -
Lal1g1277 833 PRINTS 70kDa heat shock protein signature 30 42 - -
Lal1g1277 833 PRINTS 70kDa heat shock protein signature 140 160 - -
Lal1g1277 833 PRINTS 70kDa heat shock protein signature 332 348 - -
Lal1g1277 833 PRINTS 70kDa heat shock protein signature 363 383 - -
Lal1g1277 833 MobiDBLite consensus disorder prediction 520 571 - -
Lal1g1277 833 Pfam Hsp70 protein 3 696 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1277 Lal-Chr1 14145905 14152198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1277 4 665 Calmodulin-binding Proteins AT1G16030 29.403 3.21e-87 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1277 K09489 - gmx:100778196 1355.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1277 1 14145905 14152198 Lal1g1277 1 14145905 14152198 ECH
Lal20g1191 20 16380667 16386350 Lal1g1277 1 14145905 14152198 LSH
Lal1g1277 1 14145905 14152198 Lal18g0188 18 1545747 1551351 LSH
Lal10g1138 10 18113611 18119072 Lal1g1277 1 14145905 14152198 PCT
Lal8g0237 8 1598276 1603618 Lal1g1277 1 14145905 14152198 PCT
Lal1g1277 1 14145905 14152198 Lal10g1138 10 18113611 18119072 PCT
Lal1g1277 1 14145905 14152198 Lal8g0237 8 1598276 1603618 PCT