Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1274 ATGGTTCACAAAGTTCAGTTACCACCACAACACACTACACTACACAAATTCAAACATAAAATCTCTGAGATTTTCTTCCATGATAACCATTTATACATGTTCAAGAACAAAACTTTGTGTACTAAGGTTGTTCTTTGTCTTCAATATTTGTTCCCCATTTTAGAATGGGGTCCTAACTACAATCTCTCACTTTTCCAACATGATGTTATCTCTGGTCTCACCATTGCTACTCTTGCCATTCCCCAGGGAATTAGTTATGCTAAGCTTGCAAACTTGCCACCAATTATAGGATTATATTCAAGTTTTGTGCCACCATTGATATATTCATTGTTAGGTTGTTCAAAACATCTTGGTGTTGGTCCTGTTTCAATTGCATCTTTGGTTATGGGATCAATGCTGAGTGAGACAGTTTCTTATATTCAAGATCCATTTCTCTATCTTAAGTTGGCTCTTACTGCTACTTTCTTTGCTGGTGTATTCCAATCTTCTCTTGGTTTCTTGAGGTTAGGATTTGTTATTGATTTTCTGTCAAAAGCAACATTGGTGGGTTTCATGGGTGGTGCAGCAATTATTGTATCACTTCAACAGCTTAAAGGTTTACTTGGAATAATGCATTTCACCAACAAGATGCAAATAGTACCTGTAATGCTCTCTGTGTTCAACCAAAAACATGAGAGTTTGAGGAAACCAAAGTTGTTCTGGATTTCAGCAGCTGCACCATTGACATCAGTTATTCTGTCAACCATTATAGTCTTTCTTATGAGAAATAAGGTTCACAATATTGCAATTATTGGTGAATTGCCAAAGGGTGTTAATCCACCATCATTGAACATGTTATGCTTCAATGGTCCTTATTTGGCTCTTGCTATAAAAACTGGACTTGTCACTGGAATCTTATCTCTCACAGAAGGAATTGCAGTAGGAAGAACATTTGCTGGATTTGAGAACTACCAGGTGGATGGAAACAAAGAAATGATAGCCATTGGTCTAATGAACATTGCCGAAATGGAAATTGATAAATCTGCATTCTTGTTTAACAATGAACTTGCAGGATCCTTTTCTCGGTCGGCTGTTAACTACAACGCTGGCGCACGGACAACAGTCTCTAATATAATCATGGCTTCAGCAGTTCTTGTGACACTTCTGTGTCTCATGCCTCTATTCTACTACACACCAAATGTTGTCTTAGCAGCCATTATCATCACTGCTGTGATCGGGTTAATAGATTATCAAGCTGCATATAAACTGTGGAAGGTTGACAAGCTTGACTGCTTGACCTGCTTGTGCTCCTTTTTTGGTGTTCTGTTCATTTCAGTGCCTTTGGGACTTGGAATAGCGGTGGCAATATCAGTCTTCAAGATCCTGCTTCATGTCTCTAGGCCAAACATATTGGTTTTGGGGAATATACCAGGGACGCCGATATTCCGTAACTTAAACCAATATAGAGAAGCTTTAAGGATTTCTTCATTTCTCATTTTGGCTATTGAATCTCCCATGTACTATGCTAATTCAACTTACCTGCAAGAAAGGATACTGAGATGGGTTCGTGAAGAGGAAGAGCGTATAAAAGCAAACAATGAAGATACATTGAAGTGCATAATTTTAGACATGACCGCTGTCACAGCCATAGACACAAGTGGCATAGACACTTTATGTGAACTTAGAAAGATGCTAGAGAAAAGATCACTTCAGGTTGTGTTGGCAAATCCTGTTGGAAATGTGATGGAAAAGTTACATCAGGCAAATATTTTGGAATTCTTTGGGGTGAAAGGAGTTTATCTCACAGTAGCAGAAGCTGTGGCTGACATTTCATCCTCATGGATAGTTCAACCATGA 1836 0.3856 MVHKVQLPPQHTTLHKFKHKISEIFFHDNHLYMFKNKTLCTKVVLCLQYLFPILEWGPNYNLSLFQHDVISGLTIATLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSLLGCSKHLGVGPVSIASLVMGSMLSETVSYIQDPFLYLKLALTATFFAGVFQSSLGFLRLGFVIDFLSKATLVGFMGGAAIIVSLQQLKGLLGIMHFTNKMQIVPVMLSVFNQKHESLRKPKLFWISAAAPLTSVILSTIIVFLMRNKVHNIAIIGELPKGVNPPSLNMLCFNGPYLALAIKTGLVTGILSLTEGIAVGRTFAGFENYQVDGNKEMIAIGLMNIAEMEIDKSAFLFNNELAGSFSRSAVNYNAGARTTVSNIIMASAVLVTLLCLMPLFYYTPNVVLAAIIITAVIGLIDYQAAYKLWKVDKLDCLTCLCSFFGVLFISVPLGLGIAVAISVFKILLHVSRPNILVLGNIPGTPIFRNLNQYREALRISSFLILAIESPMYYANSTYLQERILRWVREEEERIKANNEDTLKCIILDMTAVTAIDTSGIDTLCELRKMLEKRSLQVVLANPVGNVMEKLHQANILEFFGVKGVYLTVAEAVADISSSWIVQP 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1274 611 ProSiteProfiles STAS domain profile. 480 603 IPR002645 -
Lal1g1274 611 SUPERFAMILY SpoIIaa-like 486 602 IPR036513 -
Lal1g1274 611 Pfam Sulfate permease family 229 428 IPR011547 GO:0016021
Lal1g1274 611 Pfam Sulfate permease family 65 224 IPR011547 GO:0016021
Lal1g1274 611 Pfam STAS domain 481 599 IPR002645 -
Lal1g1274 611 PANTHER SULFATE TRANSPORTER 223 611 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lal1g1274 611 PANTHER SULFATE TRANSPORTER 2 225 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lal1g1274 611 CDD STAS_SulP_like_sulfate_transporter 481 596 - -
Lal1g1274 611 PANTHER SLC26A/SULP TRANSPORTER-RELATED 223 611 - -
Lal1g1274 611 PANTHER SLC26A/SULP TRANSPORTER-RELATED 2 225 - -
Lal1g1274 611 Gene3D STAS domain 460 605 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1274 Lal-Chr1 14124886 14132018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1274 2 607 Inorganic Solute Cotransporters AT3G15990 69.904 0.0 886
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1274 K17471 - gmx:100780331 965.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1274 1 14124886 14132018 Lal1g1274 1 14124886 14132018 ECH
Lal1g1274 1 14124886 14132018 Lal18g0190 18 1560631 1565544 LSH
Lal10g1142 10 18132022 18137035 Lal1g1274 1 14124886 14132018 PCT
Lal8g0234 8 1585033 1590934 Lal1g1274 1 14124886 14132018 PCT
Lal1g1274 1 14124886 14132018 Lal10g1142 10 18132022 18137035 PCT
Lal1g1274 1 14124886 14132018 Lal8g0234 8 1585033 1590934 PCT