Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1271 ATGAAGAAAGAAAGCAGCGCCGTGTTGAAAGCTGGAGAGTTCCCTACTCGATTAACTCGTTCTCAAGCTGCTTCTTCTCTTGCGTCTAAACAGATTCCCCTTTTGAAGGAGCCACAGCGAAATCGGAACCAACCATTACGTGCCAATCCAAAAAGAGCAGTTTCTGATACTAATAGTAAATGCCTTCAACATAAAAAGAGGACTGTTCTTCAGGATGTTACTAATGTCTGCTGTGAAAGTTCATACAAGAGCTGTTTCAATTCGACGATAATTCAGGCTAAGAAAAGAAAGCTGCTGAAGGCTCCTCCTGTTGCTGTGAAGCTACCGCAACTTCAAGTTGGCTCGAAAGCAAAGAGTTTACCGGAAATAGGAGTTAAATCGGAAGATACTATTTGCTCAACTAATTTGGAAAACAATGCACTTCTAAATCTGAATTCCGATAAGTGTGGCAAGGATGATAGTCTGATCGAAAATCGGAATTCTGGAACATCTGCTCAGCCTTTGATTTTTAAGAACAAAGCCGAGAAAGGTAGCTTTGATGAACTTTTGATTGCATCAAAGGATCCAGTCATCACTGACATCGACAATAATCTTGAAGACCCTCAACTATGCAGCGTCTATGTCATTGATATCTACGAGAACTTGCGCGTCGCCGAGCTTACAAGAAGGCCACATCCTAACTTCATGGAAACAGTGCAGCACGATATCACTCAAAGCATGCGCGGCATACTCGTTGATTGGCTTGTAGAGGTTTCTGAGGAATACAAATTGGGTCTAGACACTCTTTACCTCAGTGTATATCTCATAGATTGGTTTCTCTCGAAACGTTACCTTGAAAGACAAAGACTTCAGCTTCTTGGAGTCACTTGCATGCTAATTGCCTCGAAGTATGAAGAAATTAATGCCCCTCACATTGAAGATTTCTGCTTCATCACAGACAACACATACTCAAAATCTGAGGTACTAACAATGGAGAGTCAAGTGTTAAAGTTGTCTGAATATAAACTCTTTGCTCCAACAACAATAACTTTCCTCAGGAGGTTTCTTCATGCAGCACAAGCTTCTTACAAGAGTCCTAACCTTGAATTGGAGTACCTAGCCAGTTACATAGCTGAACTAGCACTGATGGACTATGGTTTCTTGAACTTCCTTCCTTCTATCATTGCTGCATCAGCTGTTTTTCTAGCTAGATGGACATTGGATCAGTCTAACCACCCATGGAATCCTACTCTTAAACACTATGCAAGTTATAAAGCATCAGATTTGAAAACCACAGTTCTTGCATTACAAGACCTACAACTCAATATCAATGACTGCCCTTTAACTGCTGTAAGGTCAAAGTACAGACAAGACAAGTTTAAATGTGTTGCAGCCTTGTCTTCACCAAAATTGATTGAAACTATGTTCTGA 1410 0.4071 MKKESSAVLKAGEFPTRLTRSQAASSLASKQIPLLKEPQRNRNQPLRANPKRAVSDTNSKCLQHKKRTVLQDVTNVCCESSYKSCFNSTIIQAKKRKLLKAPPVAVKLPQLQVGSKAKSLPEIGVKSEDTICSTNLENNALLNLNSDKCGKDDSLIENRNSGTSAQPLIFKNKAEKGSFDELLIASKDPVITDIDNNLEDPQLCSVYVIDIYENLRVAELTRRPHPNFMETVQHDITQSMRGILVDWLVEVSEEYKLGLDTLYLSVYLIDWFLSKRYLERQRLQLLGVTCMLIASKYEEINAPHIEDFCFITDNTYSKSEVLTMESQVLKLSEYKLFAPTTITFLRRFLHAAQASYKSPNLELEYLASYIAELALMDYGFLNFLPSIIAASAVFLARWTLDQSNHPWNPTLKHYASYKASDLKTTVLALQDLQLNINDCPLTAVRSKYRQDKFKCVAALSSPKLIETMF 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1271 469 Pfam Cyclin, N-terminal domain 210 335 IPR006671 -
Lal1g1271 469 CDD CYCLIN 240 329 IPR013763 -
Lal1g1271 469 Gene3D - 224 337 - -
Lal1g1271 469 MobiDBLite consensus disorder prediction 36 57 - -
Lal1g1271 469 SMART Cyclin_C_2 339 462 IPR004367 -
Lal1g1271 469 MobiDBLite consensus disorder prediction 20 59 - -
Lal1g1271 469 Pfam Cyclin, C-terminal domain 339 461 IPR004367 -
Lal1g1271 469 PIRSF Cyclin_A_B_D_E 13 468 IPR039361 -
Lal1g1271 469 SUPERFAMILY Cyclin-like 339 464 IPR036915 -
Lal1g1271 469 PANTHER CYCLINS 46 469 IPR039361 -
Lal1g1271 469 Gene3D - 210 458 - -
Lal1g1271 469 PANTHER CYCLIN-A2-4 46 469 - -
Lal1g1271 469 SUPERFAMILY Cyclin-like 199 333 IPR036915 -
Lal1g1271 469 CDD CYCLIN 339 429 IPR013763 -
Lal1g1271 469 SMART cyclin_7 246 330 IPR013763 -
Lal1g1271 469 SMART cyclin_7 343 431 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1271 Lal-Chr1 14081618 14091637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1271 18 469 Core Cell Cycle Gene Families AT1G80370 51.965 1.27e-153 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1271 K06627 - gmx:100789757 635.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1271 1 14081618 14091637 Lal18g0193 18 1590132 1596866 LSH