Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1188 ATGACTATTCCCACCACCGACGTTGATCTTGATCCCGTTGTCGGTGAATTCACCGTTACTATCAACGGCGGCACCGACCATCAACATGATGATTATGATGATGATGAATTTGTTGATCCTAATGATCCTTTTGATATTACACAAACTAAGAATGCTTCCATCGACACTCTTCGCCGTTGGAGACAAGCAGCACTGGTGCTCAATGCCTCCAGGCGTTTTAGATATACACTGGACTTGAAGAAGGAAGAGGACAAAGACAAAAAGATTAGATTGATTAGAGCGCATGCACAAGTCGTCAGAGCAGCGTTGCTTTTCAGATTGGCCGGTGAACGGGAACTAGTGATTAATACAGCAGTGACACCCCTACCTCAAGCTGATGGTGACTATGCAGTTGGGCTTGAGCAACTTACTTCAATGTCTAAGGATCAGAATGTTAAAGGCTTATCTAATTTACTAAAATCAAATCCGGAGAAAGGAATCAGTGGAGATGAAGTTGATCTGTCAAAAAGGAAAAATGCATTTGGAACTAATACATATCCTCGGAAAAAGGGGAGAAGTTTTTGGAGGTTTTTATGGGAAGCCTGGCAAGATCTGACTCTTATAATATTGATTATAGCAGCTGTAGTATCACTGGTACTTGGAATAAAAACAGAGGGTTTGGAAGAAGGATGGTATGATGGGGGAAGTATTGCTTTTGCAGTTATTCTTGTCATTGTAGTTACAGCTGTCAGTGACTATCGGCAATCTCTGCAGTTTAAGAATTTGAATGCAGAAAAGCAAAATATACAATTGGAGGTCATTAGAGGTGGCAGAACAATTAAAATATCGATATTTGATATTGTTGTTGGTGATGTTATACCCCTTAAAATAGGAGATCAGGTTCCTGCTGATGGAGTGTTAATCACCTGTCATTCACTTGCTATTGACGAATCCAGTATGACTGGTGAAAGCAAGATTGTTCACAAGGATCACAAAACACCCTTTTTGATGTCTGGCTGCAAAGTAGCTGATGGAGTTGGCATTATGCTGGTAACAAGCGTTGGTATAAATACTGAGTGGGGATTGTTGATGGCAAGTATCTCAGAAGATACCGGTGAAGAGACTCCGTTACAGGTACGATTGAATGGAGTAGCAACTTTTATTGGTGTAGTTGGCCTTAGTGTTGCTGTTTTAGTGCTTGCAGTTCTCTTGGGCAGATTCTTTTCTGGCAATACGAAAGACTTAGATGGAAATAAACAATTCACCGCTGGAAAGACTAGTATTAGTGATGCAGTAGATGGGGTCATCAAAATTTTTACCATGGCTGTCACAATTGTGGTTGTTGCAGTGCCTGAAGGTTTACCTTTGGCTGTTACCTTAACCCTGGCATACTCAATGCGGAAAATGATGGCAGACAAAGCTTTGGTACGAAGACTGTCAGCATGCGAAACTATGGGCTCTGCTACAACGATTTGCAGTGATAAAACAGGAACATTGACCTTAAATCAGATGACAGTAGTCGAGGCATATGCTGGGAGGAAGAAGTTAAACCCAGTGGATGACTCATCAAAGTTGCATCCAGAAGTTTTATCTCTGATAAATGAGGGCATTGCACAGAATTCAACTGGAAATGTTTTTGTACCCAAGGATGGTGGAGAGACAGAGGTGACAGGATCTCCTACAGAGAAGGCAATTCTTTCATGGGCAGTCAAGTTGGGTATGAATTTTGATCTTACCAGATCAATTACGGCAGTTCTCCATGTCTTCCCCTTCAATTCTGAGAAAAAGCGAGGTGGTGTTGCTCTGAAGCTGGTGGACTCGGGAGTACATATTCATTGGAAAGGAGCTGCAGAGATTGTTCTAAGAGCATGTACTCAGTATCTTGATTCAAATGGTGACTTGCAATCCATTGAAGAAGAGAAGGCATTTTTCGGGGAGGCGATTGATGACATGGCTGCTCGCAGCTTGCGTTGTGTTGCCATTGCATACAGATCATATGAATTAGAAAAGGTTCCATCTAATGAGGAAGAATTAGACCACTGGGCCTTACCAGAAGAAGAGCTTGTTTTGCTTGCTATTGTTGGAATAAAGGATCCTTGTCGCCCTGGAGTCAAAGAGGCTGTGAGAGTATGCACTGAAGCTGGTGTTAAGGTACGCATGGTTACCGGAGACAACCTTCAGACAGCAAAGGCAATAGCTTTGGAGTGTGGGATTCTGGCTTCAACTGAAGATGCAATTGAGCCAAATATAATTGAAGGAAAGAGGTTCCGTGAACTACCTGAAAAAGAAAGGGAAGAGATTGCTAAGAAAATAACGGTGATGGGGAGGTCTTCTCCTAATGACAAGCTTTTGCTTGTCCAAGCACTACGTAATGGAGGTGAAGTTGTTGCTGTGACAGGAGATGGCACCAATGATGCTCCTGCACTTCATGAGGCAGATATTGGTCTTTCGATGGGCATCGCAGGAACTGAAGTTGCAAAAGAGAGCTCAGATATTATAATCTTGGATGATAACTTTGCATCAGTAGTGAAGGTTGTCCGCTGGGGCCGTTCTGTATACGCAAACATTCAGAAATTTATCCAGTTCCAGCTTACTGTTAACGTCGCTGCTCTTGTAATAAATGTTGTGGCAGCAATAAGTTCTGGTGATGTTCCCTTAAATGCAGTACAGCTTTTGTGGGTCAACCTTATCATGGACACACTTGGGGCCCTTGCACTGGCTACTGAACCACCAACAGACCGGCTAATGAACAGATCACCAGTTGGCCGAAGGGAACCTCTCATTACGAATATCATGTGGAGAAACTTGATTGTTCAGGCCGTCTATCAAATTGCTATTCTTCTTGTTCTTAACTTCGGTGGTGATAGCATTCTACCTAAACAAGATACTAGAGCTGGTGATGTTCAAGTGAAGAATACTTTGATATTCAATGCATTTGTCATGTGCCAAATATTCAATGAGTTCAATGCTCGGAAACCAGAAGAAATGAATGTCTTCAGAGGAGTGACTAAGAACAAACTATTCATGGGAATTGTTGGAGTGACCTTTATACTTCAGATAATCATCATCGAGTTCCTTGGAAAGTTCACCTCAACAGTGAGACTTGATTGGAAGCTGTGGCTTGCTTCTCTTATTATGGGCCTAGTCAGCTGGCCTCTTGCTATAGCTGGAAAATTCATTCCAGTTCCCAAAACACCGTTGTCCCGATATGTCTTAAGGCCACTTAGGCGATTGAGGAGGTCTCGTGCTACCGCAGCACAATAA 3243 0.4252 MTIPTTDVDLDPVVGEFTVTINGGTDHQHDDYDDDEFVDPNDPFDITQTKNASIDTLRRWRQAALVLNASRRFRYTLDLKKEEDKDKKIRLIRAHAQVVRAALLFRLAGERELVINTAVTPLPQADGDYAVGLEQLTSMSKDQNVKGLSNLLKSNPEKGISGDEVDLSKRKNAFGTNTYPRKKGRSFWRFLWEAWQDLTLIILIIAAVVSLVLGIKTEGLEEGWYDGGSIAFAVILVIVVTAVSDYRQSLQFKNLNAEKQNIQLEVIRGGRTIKISIFDIVVGDVIPLKIGDQVPADGVLITCHSLAIDESSMTGESKIVHKDHKTPFLMSGCKVADGVGIMLVTSVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGVVGLSVAVLVLAVLLGRFFSGNTKDLDGNKQFTAGKTSISDAVDGVIKIFTMAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYAGRKKLNPVDDSSKLHPEVLSLINEGIAQNSTGNVFVPKDGGETEVTGSPTEKAILSWAVKLGMNFDLTRSITAVLHVFPFNSEKKRGGVALKLVDSGVHIHWKGAAEIVLRACTQYLDSNGDLQSIEEEKAFFGEAIDDMAARSLRCVAIAYRSYELEKVPSNEEELDHWALPEEELVLLAIVGIKDPCRPGVKEAVRVCTEAGVKVRMVTGDNLQTAKAIALECGILASTEDAIEPNIIEGKRFRELPEKEREEIAKKITVMGRSSPNDKLLLVQALRNGGEVVAVTGDGTNDAPALHEADIGLSMGIAGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDRLMNRSPVGRREPLITNIMWRNLIVQAVYQIAILLVLNFGGDSILPKQDTRAGDVQVKNTLIFNAFVMCQIFNEFNARKPEEMNVFRGVTKNKLFMGIVGVTFILQIIIIEFLGKFTSTVRLDWKLWLASLIMGLVSWPLAIAGKFIPVPKTPLSRYVLRPLRRLRRSRATAAQ 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1188 1080 PANTHER CATION TRANSPORTING ATPASE 29 1069 - -
Lal1g1188 1080 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 137 1055 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Lal1g1188 1080 ProSitePatterns E1-E2 ATPases phosphorylation site. 487 493 IPR018303 -
Lal1g1188 1080 Gene3D - 495 692 IPR023299 GO:0000166
Lal1g1188 1080 Gene3D - 482 837 IPR023214 -
Lal1g1188 1080 SMART Cation_ATPase_N_a_2 144 215 IPR004014 -
Lal1g1188 1080 Pfam Ca2+-ATPase N terminal autoinhibitory domain 41 83 IPR024750 GO:0005516
Lal1g1188 1080 Gene3D - 52 106 - -
Lal1g1188 1080 Gene3D - 193 1043 - -
Lal1g1188 1080 SUPERFAMILY Calcium ATPase, transmembrane domain M 144 1055 IPR023298 -
Lal1g1188 1080 Pfam E1-E2 ATPase 262 463 - -
Lal1g1188 1080 CDD P-type_ATPase_Ca_PMCA-like 167 925 - -
Lal1g1188 1080 PRINTS P-type cation-transporting ATPase superfamily signature 309 323 - -
Lal1g1188 1080 PRINTS P-type cation-transporting ATPase superfamily signature 485 499 - -
Lal1g1188 1080 PRINTS P-type cation-transporting ATPase superfamily signature 685 696 - -
Lal1g1188 1080 PRINTS P-type cation-transporting ATPase superfamily signature 707 717 - -
Lal1g1188 1080 PRINTS P-type cation-transporting ATPase superfamily signature 792 811 - -
Lal1g1188 1080 PRINTS P-type cation-transporting ATPase superfamily signature 816 828 - -
Lal1g1188 1080 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 492 689 IPR023299 GO:0000166
Lal1g1188 1080 Pfam haloacid dehalogenase-like hydrolase 482 806 - -
Lal1g1188 1080 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 424 509 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal1g1188 1080 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 758 872 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal1g1188 1080 SFLD Haloacid Dehalogenase 467 844 - -
Lal1g1188 1080 PRINTS Sodium/potassium-transporting ATPase signature 228 248 - -
Lal1g1188 1080 PRINTS Sodium/potassium-transporting ATPase signature 478 499 - -
Lal1g1188 1080 PRINTS Sodium/potassium-transporting ATPase signature 604 622 - -
Lal1g1188 1080 SUPERFAMILY Calcium ATPase, transduction domain A 263 358 IPR008250 -
Lal1g1188 1080 Pfam Cation transporting ATPase, C-terminus 877 1052 IPR006068 -
Lal1g1188 1080 Pfam Cation transporter/ATPase, N-terminus 143 210 IPR004014 -
Lal1g1188 1080 Gene3D - 166 361 - -
Lal1g1188 1080 SFLD p-type atpase 467 844 IPR044492 -
Lal1g1188 1080 PANTHER CALCIUM-TRANSPORTING ATPASE 29 1069 - -
Lal1g1188 1080 SUPERFAMILY HAD-like 483 897 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1188 Lal-Chr1 13123932 13137037 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1188 27 1075 Primary Pumps ATPases AT3G21180 76.771 0.0 1632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1188 K01537 - gmx:100777143 1742.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1188 1 13123932 13137037 Lal1g1188 1 13123932 13137037 ECH