Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1176 ATGTGTGTCGAAGAACCAGAGAAATTGGCCAATAGTATTCATGAGAATATCTTGGAACAAGTAGAAGAGAATGTCATTGACTCTACACCACACTTGGGAATGAAGTTTGAATCGGAGGTTGCCGCCTATGATTTTTATAATGAGTACAGTCAAAAATGTGGTTTTGGTATTCGTCGAGAATATGCAACTAAAAGTAGAAAAGATGGAGTTGTGACTTCAAGAAAATTCACATGCTCCAAAGAAGGAAAACGGGGTGTCGACAAACGAGACCACTTGACAAAACAGTCAAGAGCAGAAACCAAAACAGGATGTGAAGCACATATGGTTATTTCACTTGACCGAAATATGAATAAATACAATGTTGTGGGATTTGTTGCTGAACATAATCATCCTCTTCAACCACCTGCATATGTTCACATTATTCGCTCTCATCGACACATATCTAATTCACAAGCTTCACAAATTGAAATGGCAGATAATTCAAGATTAAGGCCAAAAGACTTTCATGAGTTTGTGTCCAAGCAAGCAGGTGGAATAGAAATTCTTGGTTATACCAAAAAAGACGGTAAGAATTACCTTCGAACCAAAAGAATGCAATCCTTAAGGTATGGTGAAGTGGGTGCATTGTTGATGTATTTCAAACGTCGAAGTGAAAATCCATCATTCTTTTATGACTTTCAAATGGATGTTGAAGACCAAATAACAAATATATTTTGGGCAGATGCACAAATGATCAATGATTATGAGTACTTTGGAGATGTTGTCACTTTTGACACTACGTACAAGACAAATAAGGATTATCGACCTTTGGGAGCAATAGGTGGTGAAAATCCTAAAACCATTCTAACGGATCAAGATGTTGCAATGGGCCAAGCCATTTCTTTAGTTATGCCAAACACATTCCATGGGTTATGCACTTGGCATATAAGACAAAATGCCGTAAGGCATGTGAATCACCTATATCAAAATGGTTCTACATTTTGCTTAGAGCTTGAAGCATGCATTGATCTACATGAAGATGAAAATGAATTTTTGAATGCATGGCAAGAGTTAATTGAGAATCACAAAGTTCCTGCTGACTCATGGCTACACACAATTTTTAAAGTCAAGGAAAAATGGGCATGGGCTTATGTTCGTAAAACTTTCACTGCAAGTATGAGAACTACTCAATTAAGTGAGAGCTTCAATGCTGCTTTGAAAAACCATTTGAAATCAGATTTGCATTTGGTACAATTTTTTACACACTTTGAGAGGGTTGTAAATGGGAAAAGAAACAATGAGTCAGAAGCTGAGTATGAATCAATAAATAAGCTTCCTAGATTGAAAATGTTGAAGGCCCCAATGCTTGTACAAGCATCAAAGATTTACACTCCAAGAATTTTTGAGGAATTCCAAGAGGAATACGAGGAATATCAAGGCACTTGTATAAAAGAATTGAAACAAGGGTTGTATATTGTTACAAGTTATGATAATAGTCATGAGAGAAGAGTAATGGGGAATCTTGTGGATCAAAAGGTTGCTTTTGTACATTTTTAA 1536 0.3626 MCVEEPEKLANSIHENILEQVEENVIDSTPHLGMKFESEVAAYDFYNEYSQKCGFGIRREYATKSRKDGVVTSRKFTCSKEGKRGVDKRDHLTKQSRAETKTGCEAHMVISLDRNMNKYNVVGFVAEHNHPLQPPAYVHIIRSHRHISNSQASQIEMADNSRLRPKDFHEFVSKQAGGIEILGYTKKDGKNYLRTKRMQSLRYGEVGALLMYFKRRSENPSFFYDFQMDVEDQITNIFWADAQMINDYEYFGDVVTFDTTYKTNKDYRPLGAIGGENPKTILTDQDVAMGQAISLVMPNTFHGLCTWHIRQNAVRHVNHLYQNGSTFCLELEACIDLHEDENEFLNAWQELIENHKVPADSWLHTIFKVKEKWAWAYVRKTFTASMRTTQLSESFNAALKNHLKSDLHLVQFFTHFERVVNGKRNNESEAEYESINKLPRLKMLKAPMLVQASKIYTPRIFEEFQEEYEEYQGTCIKELKQGLYIVTSYDNSHERRVMGNLVDQKVAFVHF 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1176 511 Pfam MULE transposase domain 273 312 IPR018289 -
Lal1g1176 511 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 20 274 IPR031052 GO:0006355
Lal1g1176 511 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 272 474 IPR031052 GO:0006355
Lal1g1176 511 PANTHER OS03G0181600 PROTEIN 20 274 - -
Lal1g1176 511 PANTHER OS03G0181600 PROTEIN 272 474 - -
Lal1g1176 511 Pfam FAR1 DNA-binding domain 44 134 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1176 Lal-Chr1 13025680 13027319 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal1g1176 FAR1 1.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1176 - - cam:101500125 771.155