Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1173 ATGATGGACGATGAAATGGAAACTGGCACTCTCCTTTCCCCTTACCAGGGCAGGCCCAGAACTTTCCCTAACATGCGTACTAAACCTTACACCCCACTGATATTTCGTATTCTCCGCGGTATCAACATTCGTGTCCTCTTCTTACTTTTGATCCTGGGCCTTGGAGCTATTTTTTACATGGGAGCACGTACATCGTCGATCATTCTATTTGTCCTTTCTGTCTGTATTATCAGCTTCCTTGTTGCAGTATATCTTATCAAATGGGTTCTCTCAAAAGATGAGGGCCCTCCCGAGATGGTTCAGATATCAGATGCTATACGAGATGGAGCTGAAGGCTTTTTCAGGACTCAGTATGGGAGTATATCCAAGATGGCCGTTTTTCTTGCATTTATCATTCTTTTCATATATTTGTTTCGAACTCCAACTCCCCAACACGAAGCTTCTGGCCTCGGAAGGTCAACCTCTGCATACATTACTGTAGCCGCATTCCTTTTAGGTGCCCTTTGTTCAGGTTTTGCTGGATATGTCGGGATGTGGGTGTCAGTTCGTGCCAACGTCAGAGTTTCTAGTGCTGCAAGGAGGTCTGCAAGAGAGGCGTTGCAGATAGCTACTCGTGCAGGTGGTTTATCTGCTATCATTGTTGTTGGCATGGCTGTAATTGGTATAGCAATCCTTTATGCTACATTTTATGTTTGGTTGGGAGTGGACTCGCCAGGTTCGATGAAGGTTACCGACTTGCCTCTTCTTCTAGTTGGATATGGATTTGGCGCTTCCTTTGTTGCACTGTTTGCTCAGCTGGGTGGTGGAATATACACAAAAGCAGCAGATGTTGGAGCAGACCTCGTTGGAAAAGTGGAACAGGGAATACCTGAAGATGATCCTAGGAATCCTGCTGTTATTGCTGATCTGGTTGGAGACAATGTGGGAGATTGTGCTGCTAGAGGTGCTGATCTTTTTGAAAGTATTGCAGCTGAAATAGTAAGTGCCATGATACTTGGGGGAACAATGGCACAACGCTATCCATCCGGCTTCATCTTGTTTCCTCTTGTTGTTCACTCATTTGATTTGATAGTTTCATCAGTTGGAATATTTTCAATTAGGGGTACACGTGAATCTGGAGTAATGGCTCCGGCTGAGGATCCAATGACAATTCTTCAGAAAGGATATTCTCTTACAATTGTTTTAGCTGTTCTGGCATTTGGTGTGTCTACTCGCTGGTTACTTTACACTGAGCAAGCACCTTCAGCATGGTTCAATTTTGCTTTGTGCGGTTTGGTTGGTATTATCACAGCTTACATTTTTGTATGGATAACCCAATATTATACTGACTACAAGCATGAGCCTGTGCGCACATTAGCACTTTCTAGCTCCACAGGTCATGGGACTAATATAATTGCTGGAGTCAGTTTGGGTCTTGAATCAACTGCTCTTCCAGTGCTTGTCATCAGTGTTTCAATTATCTCAGCTTTCTGGCTGGGCCAAACTGCTGGACTAGTGGATGAAACTGGAAACCCAACCGGTGGGCTTTTTGGCACAGCTGTGGCAACAATGGGAATGCTTAGCACTGCTGCCTATATTCTCACCATGGATATGTTTGGACCAATTGCTGATAATGCTGGAGGAATTGTAGAGATGAGTCAGCAGCCTGAAAGTGTCCGAGAGATCACTGATATCCTTGACGCCGTGGGAAACACAACCAAAGCTACCACCAAAGGATTTGCCATTGGTTCTGCTGCTCTTGCATCTTTCCTTTTGTTTAGTGCTTATATGGATGAGGTTTCTACATTCGCTCGTGAACCTTTTAAACAGGTTGATATTGCTATTCCTGAAATATTCGTTGGTGGATTGTTGGGTTCAATGCTTATATTTGTATTTAGTGCTTGGGCCTGTTCTGCTGTTGGCCGAACTGCACAAGAGGTTGTTAATGAAGTAAGAAGGCAGTTCATTGAGAGGCCTGGTATAATGAATTACATGGAGAAACCAGATTATGCTCGCTGTGTTGCTATCGTTGCATCTGCATCATTAAGGGAGATGATAAAACCTGGTGTTTTGGCAATCGTTTCACCTATTGTAGTTGGTTTTGTGTTCAGAATTTTGGGGTACTACACGGGGCATCCCTTACTTGGGGCTAAAGTGGTGGCTGCTTTCCTGATGTTTGCAACAGTATCTGGTATTCTTATGGCACTATTCCTGAACACAGCTGGTGGTGCCTGGGATAATGCAAAGAAGTACATTGAGACTGGAGCTCTTGGAGGCAAGGGAAGTGAGGCTCACAAAGCAGCAATAACAGGAGATACAGTGGGTGACCCGTTCAAGGACACAGCTGGCCCTTCACTTCATGTCCTCATAAAGATGCTTTCAACGATTACACTCGTAATGGCTCCAATCTTCCTGTGA 2397 0.4447 MMDDEMETGTLLSPYQGRPRTFPNMRTKPYTPLIFRILRGINIRVLFLLLILGLGAIFYMGARTSSIILFVLSVCIISFLVAVYLIKWVLSKDEGPPEMVQISDAIRDGAEGFFRTQYGSISKMAVFLAFIILFIYLFRTPTPQHEASGLGRSTSAYITVAAFLLGALCSGFAGYVGMWVSVRANVRVSSAARRSAREALQIATRAGGLSAIIVVGMAVIGIAILYATFYVWLGVDSPGSMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIVSAMILGGTMAQRYPSGFILFPLVVHSFDLIVSSVGIFSIRGTRESGVMAPAEDPMTILQKGYSLTIVLAVLAFGVSTRWLLYTEQAPSAWFNFALCGLVGIITAYIFVWITQYYTDYKHEPVRTLALSSSTGHGTNIIAGVSLGLESTALPVLVISVSIISAFWLGQTAGLVDETGNPTGGLFGTAVATMGMLSTAAYILTMDMFGPIADNAGGIVEMSQQPESVREITDILDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVSTFAREPFKQVDIAIPEIFVGGLLGSMLIFVFSAWACSAVGRTAQEVVNEVRRQFIERPGIMNYMEKPDYARCVAIVASASLREMIKPGVLAIVSPIVVGFVFRILGYYTGHPLLGAKVVAAFLMFATVSGILMALFLNTAGGAWDNAKKYIETGALGGKGSEAHKAAITGDTVGDPFKDTAGPSLHVLIKMLSTITLVMAPIFL 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1173 798 Pfam Inorganic H+ pyrophosphatase 76 793 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Lal1g1173 798 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 65 798 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Lal1g1173 798 TIGRFAM V_PPase: V-type H(+)-translocating pyrophosphatase 69 797 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Lal1g1173 798 PIRSF H+-PPtase 60 798 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Lal1g1173 798 PANTHER INORGANIC DIPHOSPHATASE-RELATED 17 798 - -
Lal1g1173 798 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 17 798 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1173 Lal-Chr1 13007723 13014518 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1173 1 798 Primary Pumps ATPases AT1G16780 85.287 0.0 1403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1173 K23025 - gmx:100787805 1375.15