Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1171 ATGTGGAGGCTGAAGATAGCAGATGGAGGGAAAGACCCATACATATTCAGCACTAACAACTTCGTAGGAAGACAAACATGGGAATATGACCCTGAAGCAGGCACTGCTGAAGAACGACAAGAGGTTGAAGCAGCTCGTCAAGATTTCTATAACAACCGCTTCAACGTCAAGCCTTGCGGTGACCTTCTTTGGCGTTTTCAGGTTCTGAGAGAAAACAACTTCAAACAAACAATACCTAAAGTGAGGATCGAAGAGGGTGAGGAGATTACATATGAGAAAGCAACAGCTTCTTTGAAAAGGGCAGCGCATCACCTATCAGCATTGCAAACTAGTGATGGACATTGGCCAGCTCAGATTGCTGGCCCCCTCTTTTTCCTTCCACCCTTGGTCAGAAAGCGGGTTAACGGACACGGCAGTACTAGTCAACATGCTAGTGTGCATAATGTCTTCTGTATGTATATCACAGGCCATGTCGAGTCTGTATTCCCTGGAGAATATCGCAAGGAGATTCTTCGTTATATATATTGTCATCAGAATGAAGATGGTGGGTGGGGACTACACATAGAAGGGCACAGCACTATGTTCGGTACTGCACTCAACTACATATGTATGCGCATTCTTGGAGTAGGACCTAATGAAGGTTTAGACAATGCTTGTGCTAGAGCAAGGAAGTGGATTCATGATCATGGTAGTGTCACACATATACCTTCATGGGGGAAAACTTGGCTTTCGATACTTGGTTTATTTGATTGGTGCGGGAGTAACCCAATGCCCCCCGAGTTTTGGATCCTTCCTTCATTCCTTCCTATGCATCCAGCTAAAATGTGGTGTTATTGCCGATTGGTATACATGCCCATGTCATACTTGTATGGGAAAAGATTTGTGGGCCCAATTACCCCTCTTATCCTAAAATTGAGAGAAGAACTATTTACTGAAGAGTATGAAAGGGTTAATTGGAAAAAAGCTCGTCACCAATGTGCAAAGGAAGACCTTTACTACCCTCATCCTTTGATACAAGATCTAATATGGGATAGTCTATACATATTCACTGAGCCACTTCTTACACGTTGGCCCTTCAACAAATTCATAAGAGAAAAGGCACTTCAAGTAACAATGAAGCATATCCATTACGAAGATGAAACTAGTCGATACTTAACCATTGGATGTGTAGAAAAGGTTTTATGTATGCTTGCTTGTTGGGCGGAAGATCCAAACGGTGATGCTTTCAAGAAGCATCTTGCAAGGGTCCCGGATTATTTATGGGTTTCAGAAGATGGAATGACCATGCAGAGTTTTGGTAGTCAGGAATGGGATGCTGGCTTTGCTGTTCAAGCTTTGCTTGCCACAAATCTAATTGAAGATGTTGGTCTTGCTCTTGGAAAAGGACATGACTTCATCAAAAAATCACAGGTTAGAGACAACCCTATGGGAGATTTTAAAAGTATGCATCGTCATATCTCTAAAGGGTCATGGACCTTCTCTGATCAAGATCATGGATGGCAAGTTTCTGATTGCACTGCAGAAGGTTTGAAGAGTAAGAAAGGTGGTTTAGCAGCATGGGAGCCAGCAGGTGCTCAAGAATGGTTGGAACTACTCAATCCCACTGAGTTTTTTGCGGACATTGTAGTTGAGCATGAATATGTTGAATGCACTGGATCGTCAATTGGGGCTCTAGTTTTGTTCAAGAAACTATACCCAGGGCATAGGAAGAAAGAGATAGAGAATTTCATTGTCAACGCAGTTCGATTCCTAGAAGATACACAAACAGAAGATGGTTCATGGTATGGAAATTGGGGAGTTTGTTTTACTTATGGAACCTGGTTTGCCCTTGTGGGTCTAGCTGCTGCTGGAAAAACTTACACCAATTGTGCTGCTATTCGCAAAGCTGTTAAATTTCTTCTCACAACACAGAGAGATGATGGTGGATGGGGAGAGAGTTATCTTTCAAGCCCAAAAAAGATATATGTTCCTCTTGAAGGAAGCCGGTCTAATGTTGTACACACCTCATGGGCTTTGATGGGTCTAATTCATGCGGGCCAGGCCGACAGAGATCCAACTCCTCTTCACCGTGCAACAAAGCTGATAGTCAATTCTCAACTAGAAGATGGTGATTGGCCCCAACAGGGTGATGAAATGTGGCGTCCAAATACAAAGGGATCGGTAAATAGGAAAGGAGGAAAAGGAAATGGATTGGTAGCAGTTGCAGTAGATAAGGATAACAAAGGGAGTCGACATGCTCTCAAATGGGCTGCTGATAGTCTTCTTACAAGAGGCCAAACCCTTCTCCTAATCCATGTTTTGCACACCAAGTCCCCACATGTTTCCTCATGCAGTGAAGGCATAATATGTAACACCAATAGTCCAGATGTATCTCCAGAGAGAGACCAACTTGTCAGTATTACAAAGGAACTCTTTCATACCTTTCATTGCTATTGTACACGCAAAGATATTCAATGCCTTGATGTCTTACTTGAAGACACTGACGTTGTGAAAGGAATAACAGAATATGTCTCTTATGCTGCAATTGAGAACTTGGTGCTTGGTGCAGCTTCAAGGCATGGCTTTATTAGGTCAGATGCGCAGCAGCCTCGGTCAGCTGGTGCGTCGTTGTCTAGGTCAGATGTGCAGCAGCCTCAGTCAGATGCGCCAAGGCGTGGCGCATGTGTCTCGGTCATTCTGGTGTGTCTGTCTCGATCAGTTCTGCTCAGCTATGGCGCGTGTTCCTCGGTCATGATGCTTGGCTCTGACTCAGCATCCTCGATCATGATGCTTGGCTCTGACTCAGCATCCTCGGTCACGATGCTTGGCTCTGACTCAGCATCATCGGTCACGATGTTTGGCTCTGATTCAACATCCTCGGTCACGATGCTTGGCTCTGACTTAGCATCCTCGGTCACGATGCTTGACCTTGACTTAGCTGTCTCGGTCAGAATGGTGGATAGGCATATTTGGCTTTTGGCTTGGCTTGGCTTGGCTTTGGATCATCATAGGGCATCCTTCAAGCCTCACAGTTGGAAAGATGAATCCAATAAGTTTGGAAAAAGAGTAGGGTTGAGTGGAAGGTCATGCATGGATTACTCAGAATCTGAGACAGATATATCATTTGTAAGCTCTGGCAGGCCTAGCACTAGCAGTGGACGTTCATCATCAGTTTACTCTAACTACATTGATTCAGGTCGTAATTCACGAATTTCAACCAGTTCAGATCATAGCTTGGGTACCGGATTCATGTTCAATGACCATACTTCACCAGATCTTTCATTTTCTAAGGAAAACAAAAGAATATCATCTTCATATTCAAATAAGAACATGGATGAAGAAGTTGGTACGAGGAGGTCGGGGCTTGAGTTAAAGCAAATGATTGAAATGTATGGTGCCGCACGCAAAGAAGCACTAACAGCTGGACAAAAGTTAATGGAACTTAACCACCAGAGAACCGAGGCAGAAAAAAAAATAGATGAGGCACAATTGTCCCAGGAATCATCATTTGCAACCATAGAAAAAGAGAAAGCAATAAGTAAAGCTACCTTGGAAAAAATTGATGCAGACACAAAAGTTGCAGAAATGGAATCAAGTAGAAGCACAAGTGTTGAAATGAAAGCTCTGAAAGAAGCTGATGAAATGAGGAAACTATTGCATAATGCAGTCCAAGCTGATGAAAGATATAAGAGATACACAATTGAGGAGATTGAAATAGCCACAGAGTTATTTTCTGAATCTCGAAAAATAGGGGAAGGAGGCTATGGCCCAGTCTATAAATGTTACCTTGATCAGATTCCAGCAGCTGTAAAGGTTCTGCGTTCAGATTCTACTCAAGGGAAGTCACAGTTTCAGAAAGAGGTTGACATACTGAGCTGCATGCGCCATCCTAATATGGTGCATCTTCTAGGAGCGTGTCCAGATCACAACATACTAATTTATGAGTATATGGCAAATGGAAGTTTAGAAGATTGTATGTTTCGAAAGAAGGACGAGAATCTCATGTCTTGGCAGCTCAGGTTTCATATTGCTGCAGAGATAGCGACGGGATTACTCTTCCTACATGAAACAAAGCCTGAACCATTAGTGCATCGTGATCTGAAACCAAGCAATATACTACTAGACCACAATTATGTAAGTAAGATTAGTGATGTTGGATTGGCAAGGATTCTCCCTGTTGTAGCTGAAAATGTAACGCGATGTCATATGACTTCAGCCGCTGGAACTTTTTGTTATATTGATCCAGAGTATCAACAAACAGGAACAATTGGTGTTAAATCTGATGTATATTCTCTAGGGATCATACTTCTTCAATTATTGACAGGTAAACCACCAATGGGTTTGGCTTACCAAGTTGGAGAGTCTATTGAGAATGACACATTTGTTGAAATGCTTGACAAATCTGTCCATGAATGGCCTCTTGAAGAAACATTATGTCTTGCAAAGATGGCAGTGAAATGTGTAGAACTCAGACGAAAAGATAGACCAGACCTCGGTAAACAAGTGTTACCGGAGCTCCAAAGACTGAGAGAGTTTGCTGAAGATATCATGAGTCCAACTACAACATTTTTTGGTGAAGAAGATAGCAGTAGTGAATCTTCTCCTAATCCAAGTCAAGCTTCTATTCAACAGGTTGGGATCATAAACCTTGATTATTATGCATGA 4644 0.4266 MWRLKIADGGKDPYIFSTNNFVGRQTWEYDPEAGTAEERQEVEAARQDFYNNRFNVKPCGDLLWRFQVLRENNFKQTIPKVRIEEGEEITYEKATASLKRAAHHLSALQTSDGHWPAQIAGPLFFLPPLVRKRVNGHGSTSQHASVHNVFCMYITGHVESVFPGEYRKEILRYIYCHQNEDGGWGLHIEGHSTMFGTALNYICMRILGVGPNEGLDNACARARKWIHDHGSVTHIPSWGKTWLSILGLFDWCGSNPMPPEFWILPSFLPMHPAKMWCYCRLVYMPMSYLYGKRFVGPITPLILKLREELFTEEYERVNWKKARHQCAKEDLYYPHPLIQDLIWDSLYIFTEPLLTRWPFNKFIREKALQVTMKHIHYEDETSRYLTIGCVEKVLCMLACWAEDPNGDAFKKHLARVPDYLWVSEDGMTMQSFGSQEWDAGFAVQALLATNLIEDVGLALGKGHDFIKKSQVRDNPMGDFKSMHRHISKGSWTFSDQDHGWQVSDCTAEGLKSKKGGLAAWEPAGAQEWLELLNPTEFFADIVVEHEYVECTGSSIGALVLFKKLYPGHRKKEIENFIVNAVRFLEDTQTEDGSWYGNWGVCFTYGTWFALVGLAAAGKTYTNCAAIRKAVKFLLTTQRDDGGWGESYLSSPKKIYVPLEGSRSNVVHTSWALMGLIHAGQADRDPTPLHRATKLIVNSQLEDGDWPQQGDEMWRPNTKGSVNRKGGKGNGLVAVAVDKDNKGSRHALKWAADSLLTRGQTLLLIHVLHTKSPHVSSCSEGIICNTNSPDVSPERDQLVSITKELFHTFHCYCTRKDIQCLDVLLEDTDVVKGITEYVSYAAIENLVLGAASRHGFIRSDAQQPRSAGASLSRSDVQQPQSDAPRRGACVSVILVCLSRSVLLSYGACSSVMMLGSDSASSIMMLGSDSASSVTMLGSDSASSVTMFGSDSTSSVTMLGSDLASSVTMLDLDLAVSVRMVDRHIWLLAWLGLALDHHRASFKPHSWKDESNKFGKRVGLSGRSCMDYSESETDISFVSSGRPSTSSGRSSSVYSNYIDSGRNSRISTSSDHSLGTGFMFNDHTSPDLSFSKENKRISSSYSNKNMDEEVGTRRSGLELKQMIEMYGAARKEALTAGQKLMELNHQRTEAEKKIDEAQLSQESSFATIEKEKAISKATLEKIDADTKVAEMESSRSTSVEMKALKEADEMRKLLHNAVQADERYKRYTIEEIEIATELFSESRKIGEGGYGPVYKCYLDQIPAAVKVLRSDSTQGKSQFQKEVDILSCMRHPNMVHLLGACPDHNILIYEYMANGSLEDCMFRKKDENLMSWQLRFHIAAEIATGLLFLHETKPEPLVHRDLKPSNILLDHNYVSKISDVGLARILPVVAENVTRCHMTSAAGTFCYIDPEYQQTGTIGVKSDVYSLGIILLQLLTGKPPMGLAYQVGESIENDTFVEMLDKSVHEWPLEETLCLAKMAVKCVELRRKDRPDLGKQVLPELQRLREFAEDIMSPTTTFFGEEDSSSESSPNPSQASIQQVGIINLDYYA 1547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1171 1547 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 147 429 IPR008930 -
Lal1g1171 1547 PANTHER LUPEOL SYNTHASE 1 510 708 - -
Lal1g1171 1547 PANTHER LUPEOL SYNTHASE 1 1 511 - -
Lal1g1171 1547 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 733 857 - -
Lal1g1171 1547 Coils Coil 1138 1158 - -
Lal1g1171 1547 PANTHER TERPENE CYCLASE/MUTASE FAMILY MEMBER 1 511 IPR018333 GO:0005811|GO:0016104|GO:0016866
Lal1g1171 1547 PANTHER TERPENE CYCLASE/MUTASE FAMILY MEMBER 510 708 IPR018333 GO:0005811|GO:0016104|GO:0016866
Lal1g1171 1547 Gene3D - 514 715 - -
Lal1g1171 1547 MobiDBLite consensus disorder prediction 862 882 - -
Lal1g1171 1547 Pfam Protein kinase domain 1238 1489 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g1171 1547 MobiDBLite consensus disorder prediction 1087 1111 - -
Lal1g1171 1547 CDD SQCY_1 98 708 IPR018333 GO:0005811|GO:0016104|GO:0016866
Lal1g1171 1547 MobiDBLite consensus disorder prediction 1515 1534 - -
Lal1g1171 1547 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 370 713 IPR008930 -
Lal1g1171 1547 Gene3D HUPs 721 859 IPR014729 -
Lal1g1171 1547 Gene3D Phosphorylase Kinase; domain 1 1203 1309 - -
Lal1g1171 1547 MobiDBLite consensus disorder prediction 1514 1534 - -
Lal1g1171 1547 MobiDBLite consensus disorder prediction 862 880 - -
Lal1g1171 1547 MobiDBLite consensus disorder prediction 705 726 - -
Lal1g1171 1547 Gene3D Transferase(Phosphotransferase) domain 1 1310 1515 - -
Lal1g1171 1547 SMART serkin_6 1237 1502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g1171 1547 MobiDBLite consensus disorder prediction 1087 1104 - -
Lal1g1171 1547 CDD STK_N 731 859 - -
Lal1g1171 1547 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1355 1367 IPR008271 GO:0004672|GO:0006468
Lal1g1171 1547 ProSitePatterns Terpene synthases signature. 591 605 IPR002365 GO:0016866
Lal1g1171 1547 SUPERFAMILY Protein kinase-like (PK-like) 1221 1492 IPR011009 -
Lal1g1171 1547 TIGRFAM squalene_cyclas: squalene/oxidosqualene cyclases 98 511 IPR018333 GO:0005811|GO:0016104|GO:0016866
Lal1g1171 1547 ProSiteProfiles Protein kinase domain profile. 1237 1517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g1171 1547 Gene3D - 144 433 - -
Lal1g1171 1547 Pfam Squalene-hopene cyclase N-terminal domain 165 424 IPR032697 -
Lal1g1171 1547 Pfam Squalene-hopene cyclase C-terminal domain 508 707 IPR032696 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1171 Lal-Chr1 12982961 13004230 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1171 712 857 Receptor kinase-like Gene Family AT1G78940 52.740 2.04e-36 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lal1g1171 Pkinase 2.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1171 K15813 - gmx:547702 1323.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1171 1 12982961 13004230 Lal1g1171 1 12982961 13004230 ECH
Lal25g0006 25 70946 74937 Lal1g1171 1 12982961 13004230 PCT
Lal1g1171 1 12982961 13004230 Lal25g0006 25 70946 74937 PCT