Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1160 GTTGAAGATATGGGAGAATGCTGTAGCCATGGTGCTACTGTTAGAGGAAAGGTGGAAAGCGAAGTGGATGGTGAAGAATATGAGCATGATCATAGCACTCATGTCAGATATGAACATGATGGATCAAGGGTCATATTAAAAGGATCCTCTATGTTTGTATCATTGGATTGCCAACAAGGTAAGAAAGGAGTTAATCAAGATGCATTGACAGTTTGGGAGGATTTCACTGGAGAAAAAGATATGATCTTTTGTGGTGTATTCGATGGACATGGTCCTCTAGGCCACAAGGTTTCACAATTCATTCGAGACAAGCTACCCTTAAAACTGTCTGAATCAATCAAAATGGCACAACAAAATGCTTGCAGATTTTATGATGCTAAGGAATCAGCAAGTGGAAGTTATGATGATATCTATGAAGGAAATAACCAAGGCATGTCCCTTGCTGCATGGGAAGCATGCTTTCTCAAGTTCTTTGATGAAATTGATGAAAAACTTGCTCAAGAGATTAATACTTATAGCTATTGCAGTGGTAGCACTGCTGTAACTGTGATTAAACAGGGTGACCAGTTGATAGTCGGCAATTTGGGCGATTCTCGAGCAGTTCTTTGCACAAGAGGGGATAGAAATCAACTTATTCCGGTTCAACTTACTGTTGACTTGAAACCTGATATTCCAAGCGAAGCTTCAAGAATCATTACATGCGAAGGTAGAGTTTTCGCATCGAAAGAGGAACCGGATGTGTACAGAATATGGATGCCTGATGATGACTGTCCTGGACTAGCTATGTCAAGAGGCTTTGGAGACTTTTGCATTAAAGATTATGGCCTTATTTCAACTCCAGATGTCTTTTATAGAAAACTTACTAAGCAAGATGAATTCGTGGTTTTGGCAACTGACGGGGTATGGGATGTGCTGACTAACAGTGAAGTAATAAACATAGTTGCTTCAGCACCAAGGATTGTAGAGGTACAAATATCCCGGAGCATAAGCCATGAAATCCATAGAAATCGCAGCAAGAACCTATTTCGCCGATTTAAATCGACTAGAAATGAAGAAACTGAAAGAGTTGATGGCAAAGTTGGTTTAGAACTTGATGAAGAATGGAAAGCTCTTGGAGGATTTGTTAGATCCAACTCAATATTAAAACTTCCATGGTTTGCTAAGAATTTGAATGAACGCCAAGCATTGAAGTACTTTAAGGGGGGGTTAGTTAAATTTCAGTTACTCTTCTAA 1233 0.395 VEDMGECCSHGATVRGKVESEVDGEEYEHDHSTHVRYEHDGSRVILKGSSMFVSLDCQQGKKGVNQDALTVWEDFTGEKDMIFCGVFDGHGPLGHKVSQFIRDKLPLKLSESIKMAQQNACRFYDAKESASGSYDDIYEGNNQGMSLAAWEACFLKFFDEIDEKLAQEINTYSYCSGSTAVTVIKQGDQLIVGNLGDSRAVLCTRGDRNQLIPVQLTVDLKPDIPSEASRIITCEGRVFASKEEPDVYRIWMPDDDCPGLAMSRGFGDFCIKDYGLISTPDVFYRKLTKQDEFVVLATDGVWDVLTNSEVINIVASAPRIVEVQISRSISHEIHRNRSKNLFRRFKSTRNEETERVDGKVGLELDEEWKALGGFVRSNSILKLPWFAKNLNERQALKYFKGGLVKFQLLF 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1160 410 PANTHER ALPHABET, ISOFORM E-RELATED 4 317 - -
Lal1g1160 410 Gene3D - 42 354 IPR036457 -
Lal1g1160 410 CDD PP2Cc 51 324 IPR001932 -
Lal1g1160 410 Pfam Protein phosphatase 2C 76 316 IPR001932 -
Lal1g1160 410 SUPERFAMILY PP2C-like 44 316 IPR036457 -
Lal1g1160 410 SMART PP2C_4 42 342 IPR001932 -
Lal1g1160 410 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 4 317 - -
Lal1g1160 410 ProSiteProfiles PPM-type phosphatase domain profile. 52 410 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1160 Lal-Chr1 12689370 12692475 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1160 4 356 PP2C-type Phosphatase Gene Family AT5G01700 47.740 8.21e-110 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1160 - - gmx:100783603 570.852