Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1040 ATGCTGAATATTAAGATGCCTCAATATATCAAGAAGGGAAAAACTTTAGCAAAATGGTATCATGTTATTTTGCTGTTACTGGCTTCACTTCTTTATGGCACAGAAGGGTTGAACACTGAGGGGCAAATCCTACTAGAGCTTAAGAAAGGTTTTCATGATAAATTTAATCTTTTGGGAGATTGGAAGTCTTCTGATGAAACACCATGTGGATGGAAAGGTGTAAGTTGCATTCTTGACTATTATAATAATCAAGTGGTCCAGTCTCTTAATTTGAGTTCAATGGGTCTTTCCGGAACTCTAAATGCGACTAGCATTGGGGGTCTGACACATCTTACTTATCTCAATCTTGCTTACAATAAGTTATCTGGAAATATACCTAAGGAGATCGGCGAGTGCTCGAGTTTGGAGTCACTTTATTTGAACAATAATCAAATTGAGGGACTAATTCCTGCTGAATTGTGTAAGCTGTCCGTGTTGACAAGTTTGAATATATGCAACAACAAACTCTCTGGTGTTATTCCAGATGAGTTAGGAAACTTGTCTTCATTGATTGATTTAGTTGCTTATAGCAACTTTCTTATTGGCCCTTTGCCTAAGTCCATTGGAAATCTTAAGAATCTGGTAACTTTCAGAGCTGGTGCAAATAACATTTCTGGTAGCTTGCCGAAGGAAATTAGTGGGTGTAAGAGCTTGATGTATCTTGGTCTTGCTCAAAATCAGATCGGAGGGGAGCTACCAAGTGATATTGGGATGCTTAACAGCTTAACAGAACTGATTTTATGGGATAATAAGTTGTCAGGATCTATTCCTAAAGCGCTCGGCAATTGCAGTAGTCTTGAGACCCTTGCTTTATATGGGAATGAGCTTGTTGGACCGATACCTCCGGAGATTGGGAACCTCCAATCATTGGAGAAGTTGTTTCTCTACAAAAATAATTTGAATGGAACCATTCCAAGGGAGATTGGAAATCTTTCTTCTTGTTTAGAACTTGATTTCTCACAAAACTCTTTATCAGGCGATATTCCTTTTGAGTTCAGCAAAATAAGTGGTCTTGATTTGTTCTTTCTATTTGAGAACCAGTTAACTGGTGTTATACCAAATGAGTTTAGCAACTTGAAGAACCTGACAAGGCTAGACCTGTCAATGAATCATCTTACAGGTCCAATTCCATTTGGCTTCCAGTATTTGACTCAAATGTACCAGTTGCAACTTTTCAACAACAACTTAACTGGTATTATTCCTCAGGGACTAGGACTCCATAGTCCTCTTTGGGTTGTTGATTTTTCCGACAACAGTTTGACAGGAAGGATACCTCCTCATCTATGCCGAAATTCTCGCTTGATATTGTTGAATCTTGCATCTAATAAGCTGTATGGAAATATACCAACATGGATATTGAACTGTGAATCATTGACACAGCTGCTGTTAGATGGAAACAGGCTTACTGGAGGCTTTCCTTTAGAGTTGTGTAAACTGATCAACATAACCGCGATTGAGTTGAACAAGAACAGATTCAGTGGTCCACTCTCGCGCGAGATTGGAAACTGCCAGAAATTGCAAAGGCTTCACATTGCAAATAATTACTTCACAATGGAGTTGCCAAAGGAAATAGGAAATATTTCTCAATTGGTGACCTTCAATGTTTCTTCAAATTTTTTCACCGGAAGAATCCCGCCTGAAATTGTTTGGTGCAAAAATCTCCAGCGGCTTGATCTGAGTCAGAACAGTTTTACCAGTTCATTGCCAAATGAGCTTGGAACACTTCAGCATTTGGAGATTCTCAAGCTCTCAAACAATAAACTTTCCGGAAATATTCCTGCAGCATTAGGTAATTTGTCTCATTTGGACTGGTTGCAGATGAGTGGCAATATGTTTTCTGGTGAAATACCTCCTCAGTTGGGTTCTCTTTCAAGCTTACAAATTGAAATGGATCTCAGTTACAATAATCTCTCTGGTAACATACCATCCCAGCTTAGCAATCTGAATATGCTTGAAAATCTCTTTCTCAATAATAACCATTTCAATGGTGAAATTCCCAGCACATTTTGCCTGCTTTCAAGCTTGATGGAGTGTAATTTCTCACACAATAACCTCTCTGGCTCTATACCTTCCACCAAAATTTTCCAAAGTATGGCCATAAGCAGCTTTATTGGTGGTAACAAAGGCCTCTGTGGTCCACCTCTCGGTGATTGCAACGACGACCCATCTTCTCGATCAGCTCCTTCGTTGAAAAGTGTTGATTCTCCTCACAGTAAAATTGTCATGATCATTGCAGCTACTGTTGGTGGTGTTTCTCTCATCTTAATAGTGGTTATTCTCTATATTATGAGATGGCCTGCAGAGACTGTTGCTTCCTTGAGACACATCGAGACTCCCACCCTGGATTCAGATATCTATTTTCCTCCAAAAGACGGTTTCACATTCAAAGAACTAGTTGAAGCTACAAAAAGTTTTCATGAAAGTTATGTTATAGGTAAGGGAGCATGTGGAACAGTTTATAAGGCGGTGATGAAATCCGGTAAGACCATTGCTGTTAAGAAGCTATCATCTAACAGTGAAGGGAACAGCATTGATAATAGTTTCAGGGCTGAGATATTGACTCTAGGAAACACAAGGCACCGAAATATAGTGAAATTGTTTGGTTTTTGCTATCACCAAGGTTCCAATCTCCTACTTTATGAGTACATGGAACGGGGTAGCTTAGGTGAACTATTGCATGGTTCTGCATATAATCTGGAATGGCCAACTCGGTTCATGATTGCTCTTGGAGCTGCAGAGGGCATTTCTTACTTGCATCTTGACTGCAAACCAATGATTATTCACCGCGATATAAAATCGAATAACATTCTTCTTGATGAAAACTATGAGGCCCATGTTGGTGATTTTGGTTTGGCAAAAGTGATTGACATGCCCCAATCAAAATCAATGTCTGCAGTTGCTGGATCTTATGGTTATATTGCTCCTGAATATGCCTACACTATGAAGGTAACAGAAAAAAGTGACATCTATAGCTATGGCGTTGTTCTCTTGGAATTGATAACGGGAAAAACTCCAGTTCAGCCATTGGAGCAAGGAGGTGATCTTGTGACATGGGTGAGAAGCCATATCCGGAACCATAACAATACATTGACAGCAGATATACTCGACAATCGCCTTGATCTTCTGGAACAAACCACTGTGAATCACATGCTAACTGTTTTGAAACTTGCTTTGTTATGCACAAGTATGTCTCCTTCTGATAGACCATCGATGCGCGAAGTCGTGTTGATGCTTATTGAGTCGAATGAAAGAGAAGGGAACTTAACACTCACTCAAACTTACCATAATCTTCCTTGCAAAGATTGCACATGA 3351 0.3957 MLNIKMPQYIKKGKTLAKWYHVILLLLASLLYGTEGLNTEGQILLELKKGFHDKFNLLGDWKSSDETPCGWKGVSCILDYYNNQVVQSLNLSSMGLSGTLNATSIGGLTHLTYLNLAYNKLSGNIPKEIGECSSLESLYLNNNQIEGLIPAELCKLSVLTSLNICNNKLSGVIPDELGNLSSLIDLVAYSNFLIGPLPKSIGNLKNLVTFRAGANNISGSLPKEISGCKSLMYLGLAQNQIGGELPSDIGMLNSLTELILWDNKLSGSIPKALGNCSSLETLALYGNELVGPIPPEIGNLQSLEKLFLYKNNLNGTIPREIGNLSSCLELDFSQNSLSGDIPFEFSKISGLDLFFLFENQLTGVIPNEFSNLKNLTRLDLSMNHLTGPIPFGFQYLTQMYQLQLFNNNLTGIIPQGLGLHSPLWVVDFSDNSLTGRIPPHLCRNSRLILLNLASNKLYGNIPTWILNCESLTQLLLDGNRLTGGFPLELCKLINITAIELNKNRFSGPLSREIGNCQKLQRLHIANNYFTMELPKEIGNISQLVTFNVSSNFFTGRIPPEIVWCKNLQRLDLSQNSFTSSLPNELGTLQHLEILKLSNNKLSGNIPAALGNLSHLDWLQMSGNMFSGEIPPQLGSLSSLQIEMDLSYNNLSGNIPSQLSNLNMLENLFLNNNHFNGEIPSTFCLLSSLMECNFSHNNLSGSIPSTKIFQSMAISSFIGGNKGLCGPPLGDCNDDPSSRSAPSLKSVDSPHSKIVMIIAATVGGVSLILIVVILYIMRWPAETVASLRHIETPTLDSDIYFPPKDGFTFKELVEATKSFHESYVIGKGACGTVYKAVMKSGKTIAVKKLSSNSEGNSIDNSFRAEILTLGNTRHRNIVKLFGFCYHQGSNLLLYEYMERGSLGELLHGSAYNLEWPTRFMIALGAAEGISYLHLDCKPMIIHRDIKSNNILLDENYEAHVGDFGLAKVIDMPQSKSMSAVAGSYGYIAPEYAYTMKVTEKSDIYSYGVVLLELITGKTPVQPLEQGGDLVTWVRSHIRNHNNTLTADILDNRLDLLEQTTVNHMLTVLKLALLCTSMSPSDRPSMREVVLMLIESNEREGNLTLTQTYHNLPCKDCT 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1040 1116 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 9 1102 - -
Lal1g1040 1116 SMART LRR_typ_2 252 276 IPR003591 -
Lal1g1040 1116 SMART LRR_typ_2 300 324 IPR003591 -
Lal1g1040 1116 SMART LRR_typ_2 396 419 IPR003591 -
Lal1g1040 1116 SMART LRR_typ_2 156 180 IPR003591 -
Lal1g1040 1116 SMART LRR_typ_2 372 395 IPR003591 -
Lal1g1040 1116 SMART LRR_typ_2 133 155 IPR003591 -
Lal1g1040 1116 SMART LRR_typ_2 588 612 IPR003591 -
Lal1g1040 1116 SMART LRR_typ_2 108 132 IPR003591 -
Lal1g1040 1116 Gene3D Phosphorylase Kinase; domain 1 783 895 - -
Lal1g1040 1116 ProSiteProfiles Protein kinase domain profile. 818 1092 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g1040 1116 ProSitePatterns Serine/Threonine protein kinases active-site signature. 939 951 IPR008271 GO:0004672|GO:0006468
Lal1g1040 1116 SUPERFAMILY RNI-like 88 410 - -
Lal1g1040 1116 SUPERFAMILY RNI-like 389 704 - -
Lal1g1040 1116 Pfam Leucine rich repeat 86 145 IPR001611 GO:0005515
Lal1g1040 1116 Pfam Leucine rich repeat 566 624 IPR001611 GO:0005515
Lal1g1040 1116 Gene3D Ribonuclease Inhibitor 36 189 IPR032675 -
Lal1g1040 1116 Gene3D Ribonuclease Inhibitor 190 276 IPR032675 -
Lal1g1040 1116 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 9 1102 - -
Lal1g1040 1116 SUPERFAMILY Protein kinase-like (PK-like) 798 1091 IPR011009 -
Lal1g1040 1116 Pfam Protein kinase domain 819 1088 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g1040 1116 Gene3D Ribonuclease Inhibitor 348 420 IPR032675 -
Lal1g1040 1116 Gene3D Ribonuclease Inhibitor 277 347 IPR032675 -
Lal1g1040 1116 Pfam Leucine rich repeat N-terminal domain 38 76 IPR013210 -
Lal1g1040 1116 Gene3D Ribonuclease Inhibitor 421 735 IPR032675 -
Lal1g1040 1116 SMART serkin_6 818 1091 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g1040 1116 Gene3D Transferase(Phosphotransferase) domain 1 896 1109 - -
Lal1g1040 1116 ProSiteProfiles Leucine-rich repeat profile. 134 155 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1040 Lal-Chr1 8210321 8215377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1040 37 1093 Receptor kinase-like Gene Family AT5G56040 37.103 0.0 626
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lal1g1040 Pkinase 2.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1040 - - gmx:100807838 1704.11