Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0982 ATGGGGAATACTTGTGTTGGCCCAAGCATTCCCAAAAATGGTTTTCTTCATTCAGTTTCTGCAGCAATGCGGTGGTCCCAATCATCGGAAGGATCGGTATCGAATTCTAATATAGAAAGTGCAAATGAGGAAACAACTAAAGAGCCTGAGTCACCCTTGCCTGTCCAAAGCAACCCCCCTGAGCTGATAACTATGCCGAAACCAGAAGCAAAACAAGAAACAGAATCCGAAGTAGAACCCGAACCGGAACCGGAACAAGAAAAGGAGAAGAAGAAAACCAAGAAGCCTGATCCTATGAAGAGAGTTTCTAATGCAGGACTTCAAGTTGATTCTGTGTTACAAACAGAAACTGGTAATTTCAAGGAATTCTTCAGTTTGGGGAGGAAACTTGGACAGGGTCAGTTCGGGACAACATTCTTGTGTATCGAGAAGGCGACCGGACATGAATATGCCTGTAAATCTATTGCAAAGAGGAAGCTGGTAACTGATGAGGATGTTGAGGATGTGAGAAGAGAAATTCAGATTATGCACCACTTGGCTGGGCATCCTAATGTTATATCCATCAAAGGTGCTTATGAGGATGCAGGGGCAGTTCATGTTGTGATGGAGTTATGTGCCGGTGGTGAGCTTTTCGATAGAATTATTCAACACGGCCATTATACTGAAAGACAAGCAGCGGACCTCATTAGGACTATAGTCGGCGTTGTGGAAGCTTGTCACTCACTAGGTGTGATGCACAGAGACCTTAAACCTGAGAATTTTCTCTTTGTCAATAAACAGGAGGATTCACCTCTCAAAACCATTGACTTCGGATTATCCATGTTCTTTAAGCCAGGTGAAATATTTGTGGATGTAGTTGGCAGTCCATATTATGTTGCCCCAGAGGTTTTGCGAAAGCGTTACGGTCCTGAAGCAGATGTTTGGAGTGCTGGTGTTATCCTCTACATTCTTTTGAGTGGAGTACCTCCATTTTGGGCTGAAAGTGAACAAGGAATATTTGAGCAGATTCTGCGTGGCGATCTTGACTTCGATTCAGATCCCTGGCCTCAAATTTCTGAAAGTGCAAAAGATTTAGTAAGGAAAATGCTTGTTCGTGACCCTAGATGGAGGATGACCGCACATCAAGTATTATGCCATCCATGGATTCAAGTTGATGGTGTGGCTCCTGACAAGCCACTTGATTCCGCCGTATTAAGTCGTTTGAAGCAATTTTCTGCGATGAACAAGCTCAAGAAAATGGCTCTTATAGTTATTGCAGAGAGCTTATCTGTAGAAGAAATAGCTGGCTTGAAAGAAATGTTCAAGATGATAGATACAGACAACAGTGGTCAAATCACTTTTGAAGAACTTAAAGCTGGTTTGAAAAGAGTTGGTGCAAATCTTAAGGAGTCTGAAATTTATGATTTAATGCAAGCCGCTGATGTAGATAACAGTGGAACAATTGATTATGGCGAGTTCATTGCTGCAACATTGCATCTAAACAAGATTGAAAGAGAAGATCATCTATTTGCAGCCTTTTCGTACTTCGATAAAGACGGAAGTGGCTATATTACACCAGATGAACTTCAACAAGCTTGTGATGAGTTTGGCATAGGTGATGTTCGGTTGGAGGAGATGATCGGAGAAATCGATGAAGATAATGATGGAAGAATAGATTATAATGAATTTGTGGCTATGATGCAGAAAGGAAATGTTCCTATGATTGGTAGGAAAGGCTTAGAACATAGTTTCAGCATTGGTTTCAGGGGGGCATTCAAACACTAG 1764 0.4189 MGNTCVGPSIPKNGFLHSVSAAMRWSQSSEGSVSNSNIESANEETTKEPESPLPVQSNPPELITMPKPEAKQETESEVEPEPEPEQEKEKKKTKKPDPMKRVSNAGLQVDSVLQTETGNFKEFFSLGRKLGQGQFGTTFLCIEKATGHEYACKSIAKRKLVTDEDVEDVRREIQIMHHLAGHPNVISIKGAYEDAGAVHVVMELCAGGELFDRIIQHGHYTERQAADLIRTIVGVVEACHSLGVMHRDLKPENFLFVNKQEDSPLKTIDFGLSMFFKPGEIFVDVVGSPYYVAPEVLRKRYGPEADVWSAGVILYILLSGVPPFWAESEQGIFEQILRGDLDFDSDPWPQISESAKDLVRKMLVRDPRWRMTAHQVLCHPWIQVDGVAPDKPLDSAVLSRLKQFSAMNKLKKMALIVIAESLSVEEIAGLKEMFKMIDTDNSGQITFEELKAGLKRVGANLKESEIYDLMQAADVDNSGTIDYGEFIAATLHLNKIEREDHLFAAFSYFDKDGSGYITPDELQQACDEFGIGDVRLEEMIGEIDEDNDGRIDYNEFVAMMQKGNVPMIGRKGLEHSFSIGFRGAFKH 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0982 587 ProSitePatterns EF-hand calcium-binding domain. 438 450 IPR018247 -
Lal1g0982 587 MobiDBLite consensus disorder prediction 68 99 - -
Lal1g0982 587 ProSiteProfiles EF-hand calcium-binding domain profile. 425 460 IPR002048 GO:0005509
Lal1g0982 587 CDD EFh 501 561 IPR002048 GO:0005509
Lal1g0982 587 MobiDBLite consensus disorder prediction 23 52 - -
Lal1g0982 587 SUPERFAMILY Protein kinase-like (PK-like) 124 383 IPR011009 -
Lal1g0982 587 ProSiteProfiles EF-hand calcium-binding domain profile. 497 532 IPR002048 GO:0005509
Lal1g0982 587 ProSiteProfiles EF-hand calcium-binding domain profile. 535 566 IPR002048 GO:0005509
Lal1g0982 587 ProSiteProfiles EF-hand calcium-binding domain profile. 461 496 IPR002048 GO:0005509
Lal1g0982 587 Pfam Protein kinase domain 125 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0982 587 Gene3D Phosphorylase Kinase; domain 1 126 209 - -
Lal1g0982 587 ProSitePatterns Protein kinases ATP-binding region signature. 130 157 IPR017441 GO:0005524
Lal1g0982 587 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 2 66 571 - -
Lal1g0982 587 ProSiteProfiles Protein kinase domain profile. 124 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0982 587 Gene3D - 407 566 - -
Lal1g0982 587 Gene3D Transferase(Phosphotransferase) domain 1 210 406 - -
Lal1g0982 587 SMART serkin_6 124 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0982 587 ProSitePatterns EF-hand calcium-binding domain. 510 522 IPR018247 -
Lal1g0982 587 SUPERFAMILY EF-hand 422 562 IPR011992 -
Lal1g0982 587 CDD EFh 430 489 IPR002048 GO:0005509
Lal1g0982 587 CDD STKc_CAMK 123 381 - -
Lal1g0982 587 Pfam EF-hand domain pair 430 490 IPR002048 GO:0005509
Lal1g0982 587 Pfam EF-hand domain pair 500 561 IPR002048 GO:0005509
Lal1g0982 587 SMART efh_1 465 493 IPR002048 GO:0005509
Lal1g0982 587 SMART efh_1 535 563 IPR002048 GO:0005509
Lal1g0982 587 SMART efh_1 501 529 IPR002048 GO:0005509
Lal1g0982 587 SMART efh_1 429 457 IPR002048 GO:0005509
Lal1g0982 587 ProSitePatterns Serine/Threonine protein kinases active-site signature. 244 256 IPR008271 GO:0004672|GO:0006468
Lal1g0982 587 ProSitePatterns EF-hand calcium-binding domain. 544 556 IPR018247 -
Lal1g0982 587 PANTHER SERINE/THREONINE-PROTEIN KINASE 66 571 - -
Lal1g0982 587 ProSitePatterns EF-hand calcium-binding domain. 474 486 IPR018247 -
Lal1g0982 587 MobiDBLite consensus disorder prediction 23 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0982 Lal-Chr1 7505602 7510746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0982 1 582 EF-hand Containing Proteins AT5G04870 75.856 0.0 935
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lal1g0982 Pkinase 3.3e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0982 K13412 - gmx:100797449 974.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1092 2 7711820 7717842 Lal1g0982 1 7505602 7510746 LSH
Lal9g1009 9 7853900 7858537 Lal1g0982 1 7505602 7510746 LSH
Lal11g1288 11 16538355 16542097 Lal1g0982 1 7505602 7510746 PCT