Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0973 ATGTGCCGTTGGATGAAATTATTGGATGACCTGTTACTTGCCAGTGACCTTTTAGAAGTCGGTTTGGTGGAGGATGACTTCTGTATAGAAGTCGGTTTGGTGGAGGATGACTTCTGTACTAGAGAAGTCGGTTTGGGGAGGGACGACTTCTATAGAGAAGTCGGTTTGGGGAGGGGCGACTACCTAGAGAAGTCGGTTTGGCAGTGTGTGACTTCTCTTGAGAAGTCGGTTTGGCGAGACTTTAGATACATATACAAAACAACACTGCAGAGACTTTGGATGGAAGAAGAAATGAACTTGAATCATGAAATACCAGAGGCTGTAGATGAAATTGATGTTAGTGAAGATGAAAATATTAATGAAGTAGAGGAGTTTGATTTTGAAGAAATTGACTTTGGATCATTAAACGAAGATGAAGTAAAGAAATATAGGTTTGCAAACAATGATATTGCATATAATTTTTATAAGATGTATGGTATGAAGAAAGGATTTGGCATTAGAAAATATCATACCCGTCGGGACAAGGATGGTGAAATTTTATGGCAATCATTTTTTTGTGATAGAGAGGGATTTAGGGATAAGAAAAATGAATTAGTTCGAAAAAGGGCTCCAAGAAAAGAAACGAGATGTGGTTGTTTAGCAAGAATGAAAATTCACATTGGCAATGAGAAAGGTGATTGGTATGTCAGTTTTTTTGTTGATGATCATAATCATGAATTGGTTGGCGAACATTATGGTGGGATGATAGCGTCAAACCGAAGTATGACAGAAACAGACATCGCTTTGATGAACACAATGAGAGAAGTCGGAATTGGAACAGGCAAAATTTTTGGTTCATTCGCTGGTCAATCTGGTGGATATCGGTATATTGGATTCTCTAAGAAAGATATGTATAATCAAATTCAGAGACAAAGAATAATAGGAAATGGTGACACAGAATCAGCATTACAATACTTGAAGGAACAATCAAAATCAGATTCTGCAATGTACTGGAGACATAGTGTAGATGAAGAAGGTAAGTTGCAACAATTATTTTGGGCGGATGGATGCAGCATTTTTGACTACTCAATTTTTGGAGATGTTCTAGCTTTTGATGCAACCTATGGTCGAAACAAGTACAAGTTTCCGGTGGTCATTTTTTCTGGTGTGAACCATCACAAGCAAACAACAGTATTTGCTGCTGGTATTGTGTCCAACGAGACAGAGGAAATGTACGTTTGGCTTTTGGGAAATTTCTTGGAGGCAATGAATGAGAAACATCCAAAGTGTGTTATCACTGATGGTGACTTGTCGATGAAAAATGCAATCAAAAGAATTTTCCCTGCAACTCATCATAGACTATGTGCTTGGCATATATGTAACAATGCTGTGAAAAATATAAAGAAGAATAACTTTCATAAGGACTTCCAGAAAGTTATGTATGCTGATGTTGAGATTGATGATTTTAATATGATGTGGGAGGAACTTATTGCTAAGCATGCACTTCATAATAATGCTTGGGCATCTCAGATATTTGATTGCAGAAGTATGTGGGCTAGGTCATACATTCGAGGAAAGTTCTATGCTGGTTTGCATACGACATCACGTTGCGAGGGATTACATTCACAAATGGGGAGATATGTAGAATCTGGCTATAATGTTACTGAATTTTTACATCACTTTCAACGATGTCTAAGTTACATGAGGAACAATGAGGTGATGGAAGATTTTAAATCTTCGTATGGTGATGAATTGTTACAAACTCCTTATCATAGTTTAGAGGGTCATGCTGCTTCCATATATACTAGAGTTGTTTTCAAAGAATTCCGTGAAATTTTATTGGAAGCTGCAAAATTAAGGATAATTTCTTCCCAACAAACCTCAAGTCATGTCATATACAAGATTGGGAAGCATTATAATCCGAACAAGAGATGGCATGTATCACATTATGATAATGGTAGTAATGTGGACATCAAATGCTCGTGTAAACGAATGGAATCTTTTGGGATGCCATGCAGTCATAGTGTTTTTGTGTTACTAATTTTGGACATATCACAATTGCCATCTTGTTTGGTTCTGGAAAGGTGGACAAAGAAAGCAAAAAATGTTGAAGGTGTTAATTTTCAACAATGCGAGTTAAGCAGAGAATCGGTTAAAACCAGTAGATATGGAGCTTTGAGTGATGCTTGTAGGGTGTTATGTAACCTTGCTTGCGAAACGGAGGAAGACTTTTCAGAGATGCTGGAAAAAGTTTATAACGAATGTGGTAGACTCCGTTCAAAACAACACTCTAGTTCGATGGAAAATGTTGACAATGCCAAATGTAGATCAAGTAAGAGACCTAGTTCGAGTGCGTGCTAA 2340 0.3735 MCRWMKLLDDLLLASDLLEVGLVEDDFCIEVGLVEDDFCTREVGLGRDDFYREVGLGRGDYLEKSVWQCVTSLEKSVWRDFRYIYKTTLQRLWMEEEMNLNHEIPEAVDEIDVSEDENINEVEEFDFEEIDFGSLNEDEVKKYRFANNDIAYNFYKMYGMKKGFGIRKYHTRRDKDGEILWQSFFCDREGFRDKKNELVRKRAPRKETRCGCLARMKIHIGNEKGDWYVSFFVDDHNHELVGEHYGGMIASNRSMTETDIALMNTMREVGIGTGKIFGSFAGQSGGYRYIGFSKKDMYNQIQRQRIIGNGDTESALQYLKEQSKSDSAMYWRHSVDEEGKLQQLFWADGCSIFDYSIFGDVLAFDATYGRNKYKFPVVIFSGVNHHKQTTVFAAGIVSNETEEMYVWLLGNFLEAMNEKHPKCVITDGDLSMKNAIKRIFPATHHRLCAWHICNNAVKNIKKNNFHKDFQKVMYADVEIDDFNMMWEELIAKHALHNNAWASQIFDCRSMWARSYIRGKFYAGLHTTSRCEGLHSQMGRYVESGYNVTEFLHHFQRCLSYMRNNEVMEDFKSSYGDELLQTPYHSLEGHAASIYTRVVFKEFREILLEAAKLRIISSQQTSSHVIYKIGKHYNPNKRWHVSHYDNGSNVDIKCSCKRMESFGMPCSHSVFVLLILDISQLPSCLVLERWTKKAKNVEGVNFQQCELSRESVKTSRYGALSDACRVLCNLACETEEDFSEMLEKVYNECGRLRSKQHSSSMENVDNAKCRSSKRPSSSAC 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0973 779 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 141 756 IPR031052 GO:0006355
Lal1g0973 779 Pfam FAR1 DNA-binding domain 153 241 IPR004330 -
Lal1g0973 779 ProSiteProfiles Zinc finger SWIM-type profile. 638 676 IPR007527 GO:0008270
Lal1g0973 779 Pfam MULE transposase domain 361 455 IPR018289 -
Lal1g0973 779 PANTHER OS02G0262500 PROTEIN 141 756 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0973 Lal-Chr1 7416459 7419070 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal1g0973 MULE 2.1e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0973 - - lang:109359799 614.379