Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0970 ATGGGCGTAGAGAACTATCATGTGATCGAGCTCGTAGGTGAAGGTTCCTTTGGCAAGGTATATAAAGGGAGGCGCAAACATACTGGCCAGACGGTTGCGATGAAGTTCATAATGAAGCACGGCAAAACTGATAAGGATATTCACAATTTGAGGCAAGAAATTGAGATATTAAGAAAGTTGAAGCATGAAAATATTATTCAAATGCTTGACTCCTTTGAAAGTCCACAAGAGTTTTGCGTTGTCACTGAATTCGCTCAAGGTGAACTATTTGAGATTCTCGAGGATGATAAGTGCCTTCCTGAAGAACAAGTTCAAGCAATTGCAAAGCAATTGGTAAGAGCCTTACATTATTTGCATTCCAATCGGATCATCCATCGTGATATGAAGCCACAAAATATTCTCATTGGTGCTGGATCTGTTGTCAAGCTTTGTGATTTTGGGTTTGCACGCGCAATGTCCACAAATACAGTTGTTTTGCGATCTATAAAAGGCACTCCATTATACATGGCTCCAGAGCTTGTTCGAGAACAGCCTTACAATCACACTGTGGACTTATGGTCTCTTGGTGTTATATTGTATGAGTTATTTGTTGGCCAACCTCCATTTTACACAAACTCTGTGTATGCTCTCATTCGGCACATTGTGAAGGATCCTGTCAAATATCCAGACCGCATGAGTCTAAATTTCAAAAGTTTTTTGAAGGGCTTGCTTAACAAGGCACCAGAAAGTCGACTTACTTGGCCTGCTCTTCTCGAGCACCCTTTTGTTCAAGAAACTTCCGAAGAACGTGAGGCCAGGGAATGTGATATAACTGTTTCACATAAGGGCAGTGTTTCGGCAACAAGGGTTGAAGGGAAAACCATTCAAACCCCCACAGGTTCAGCTCGTTCTAGTACTGCAAAGGATCATATTGCTTCACCGCTTCAGAGTGATGCTCAATTTAATGGCCCTAACATAGAGAGAGCCAATTCTTCAGTGCTTGATGAGTCCCCGGGGTTTTCAAATCAAAATGCTGTGGGAGAATCAGGCTGCCAAAGATTGGACAGACTTGAAAATAACTCCCGCACAGTCAAAGGCGCAAAAATAATAGGTCAAGACAATGAAGCGTTGGGACATATTTTGCTACCATTGAAAAAATGGTCAAAAGGAACTCAGAATATTTGCAGTGATCAAGATGTTCCTGATACAAACCAGTCACTGCGGATTCTGTCAAATCTAGTTGCAGCCGGTGTCTTCGGTTCTAGTGGACGAACAGATGAACTAATAACTGAGCTTATAGTGTTTACTGGATCTGTTATAACCATGAAATCCCCTGATCTTATTGACTTGATAGCAAAGAGTTTCTCCATCACTAAAATTTTGCTAGATAATGGTGGGGGTTGTGCTTCGAGCGCTTATTTCAAGAACTGGGTTGCAGTTATTGAAATCTATACTCAGGTTGTAACTTCAGCTAATGATGCATCTGGAAGAGTTTTGCACGAGTCTAGTGCCTGCATTACAGTTATCTTATCTAGAGTTGCTCAGGTGCTTAGATCATCTCCTCAAATTTCAGATCCGGAGACACTGAATGAAACAGCTAATAAAATTTTGGACCATGCTAAAGCATCTGGTTTAGTAGACCATTTGTGTCTGTGCTTAGCCAATTCAGGCTCCAGTCTTATGTCAGGTTCTTCCAACATGCTACGAGCTGCTTCTGAAGCATGCAGAGCTATCTGGTTTTTGATTAATGCACTGGATATCATTTATATGAAGAAGAATGACATTTTGTTTCCCATAAATGCTTTGTGGAGTCATTCTTTGCATAGGATGAAAATTGTAGATCATGAACAAGATCCTTTAGCTGAATCTGAATCAACAAAAGTTGTTGATGCTGTGGTGAGAGCATTCCTAAGATCCAAAGCAGTTCAGGTTGCTGTTTACTATTGTTTTCGTCAACGTCTCGAATCTGCGATGGCTTGTGGTTTTCAGCTTCTTTTAAGATGCTGCATACACAGTGGATTTGTTCCGGTTCTTCTTTGTGGTCTTCCCAGTTCCCTTCCTGCTACCACTGTTGTTAGTGGTGGGGGTGATGGTACTATTGTTTCAGAGATATTCTCTGTTTTGTCATTATGTAGTTCCAATCTTAACAAAGATGCACAGAGTGTAGAACCAAGTAATGTTAAGTGTAAATTAATGGATCCTTCTTCCCTGGTTCGCCATTCATGTCTCATTCTTGCAATAATTGCACAATGTCTGAAGTCAACTGGAAGAAACTCAGCAATTTTTATGCTCACTACCTCACCAAAGAAGCAGCTCGCTCGACTTTCACTGCTTGCTCATAATATTTCTTCCGATGATAAAACAAAAGCCTCTTTCCACTCTCAAAGTGCATCAGCCATGTTGGCTTTGGCATCCATTTTATCCCTTGAATCTGGGGCGTCAGTTGAGTCTACGATATCTGAAATTGCTATGCCTTTAATATCTCGAACTTCCACATTATGTGACCATCTTAAATTTTCACTTGACAATGAAAATGAATCAGACCCTAGCAATGGGAAGCTCTCATATTGGCAAGGGGTAAGAGATGGGTGTGTTGGTCTTCTAGATTGTAGACTCATGTGGGGAGGACCATTAGCTGTGCAGCAGTTGTGTGCAAGTGGCATCCCAATTCTTCTTATTGGCTTATTAGGCAATGATGTTTTACATGGTTCTCTTGGAAATGAGAGCCTGAATGATAGAGTTGGATTATCTCCTGTTGGTATTGTATGGACAATTTCATCAATATCCCATTGTCTTTCTGGCAGTGCTTTGACTTTTCGTCAGATATTGATCCGGAATGAACATATTAAGCTCATCTCCAACTTGATATGTGATGTTCATCTAGAATTGGTACACCGCTGGATCGGACCTGGTGGAGGGAGAGCTGGAATCAGAGATCTAATTAATGCAGTAGTAGATCTCCTAGCATTTCCTTTTGTTGCTCTGCAAAATGCACCTGGTTTGCTATCAGCTACTGCATCTGTCAGCAGTGGATTTCTTCTTAACATTGGTTCAACTGGTCAGAGAGTTTGCATGGAAGACAAAGATATAGTTAGAGCAATAGAGGAAGACATGGGCAAATACATTAAGATCCTCGTGGAGGTGGGTGTGCCTGCCATTGTCCTACGATGCATAGATCGTATGGAGTTGAATGATTTGGGAAGGCCTGTGGCCTTTCTTGCGAAAATGGTATGTCAGCGACCTCTAGCATTGCAACTTGTGAGTAAAGGTCTTCTAGATCCAAATAGGATGAGAAGATTGCTTGATGGTTTGGGCCCAAAAGAAGTCACACTAGATGCCCTGATGATAATATCTGATCTTGCACGCATGGACAAGGGATTCTATGAGTACATTAAAGGTGCATCTATTTTGGAGTTCTTGAAGAGTTTTCTTTCACACGAGGATCCCAACTTGCGTGCCAAAGCTTGCAGTGCTCTTGGAAACATGTGTCGTCATAGCGCCTATTTTTATATATCACTGGAAAAACATCAAATTGTTAGTATCCTTATTGATCGCTGTTCTGATCCAGACAAACGAACACGGAAATTTGCTTGCTTTGCTATTGGAAATGCAGCTTACCATAATGATGTATTGTATGAAGAGCTGAGGAGGTCGATACCTCAACTCGCAAATTTGCTGCAGATCGCAGAGGAGGACAAGACTAAAGCAAATGCAGCCGGTGCACTTAGCAACCTAGTTCGCAACTCTGACAAACTTTGTGAAGATATTGTAACCAAAGGAGCTATTCAGTCTCTGCTGAAGTTAATCTCTGATTGTGCGGTAACAGCGCTAAACCCAAGCAGAAATGATTCCGCAAACGAGTCTCCTTTAAAGATAGCTCTCTTTTCCTTAGCAAAGATGTGTGCACATCCACTCTGCAGACGTTTCATCCGTTCATCACCTTTGTTCCATGTGATTGGAAGGCTGCAGCAGTCTCCAGAATCATCCATTGCCAAGTATGCCTCTGTCATCATTAATAAAGTTGCTGATTCTTAA 4014 0.415 MGVENYHVIELVGEGSFGKVYKGRRKHTGQTVAMKFIMKHGKTDKDIHNLRQEIEILRKLKHENIIQMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQAIAKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSTNTVVLRSIKGTPLYMAPELVREQPYNHTVDLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDRMSLNFKSFLKGLLNKAPESRLTWPALLEHPFVQETSEEREARECDITVSHKGSVSATRVEGKTIQTPTGSARSSTAKDHIASPLQSDAQFNGPNIERANSSVLDESPGFSNQNAVGESGCQRLDRLENNSRTVKGAKIIGQDNEALGHILLPLKKWSKGTQNICSDQDVPDTNQSLRILSNLVAAGVFGSSGRTDELITELIVFTGSVITMKSPDLIDLIAKSFSITKILLDNGGGCASSAYFKNWVAVIEIYTQVVTSANDASGRVLHESSACITVILSRVAQVLRSSPQISDPETLNETANKILDHAKASGLVDHLCLCLANSGSSLMSGSSNMLRAASEACRAIWFLINALDIIYMKKNDILFPINALWSHSLHRMKIVDHEQDPLAESESTKVVDAVVRAFLRSKAVQVAVYYCFRQRLESAMACGFQLLLRCCIHSGFVPVLLCGLPSSLPATTVVSGGGDGTIVSEIFSVLSLCSSNLNKDAQSVEPSNVKCKLMDPSSLVRHSCLILAIIAQCLKSTGRNSAIFMLTTSPKKQLARLSLLAHNISSDDKTKASFHSQSASAMLALASILSLESGASVESTISEIAMPLISRTSTLCDHLKFSLDNENESDPSNGKLSYWQGVRDGCVGLLDCRLMWGGPLAVQQLCASGIPILLIGLLGNDVLHGSLGNESLNDRVGLSPVGIVWTISSISHCLSGSALTFRQILIRNEHIKLISNLICDVHLELVHRWIGPGGGRAGIRDLINAVVDLLAFPFVALQNAPGLLSATASVSSGFLLNIGSTGQRVCMEDKDIVRAIEEDMGKYIKILVEVGVPAIVLRCIDRMELNDLGRPVAFLAKMVCQRPLALQLVSKGLLDPNRMRRLLDGLGPKEVTLDALMIISDLARMDKGFYEYIKGASILEFLKSFLSHEDPNLRAKACSALGNMCRHSAYFYISLEKHQIVSILIDRCSDPDKRTRKFACFAIGNAAYHNDVLYEELRRSIPQLANLLQIAEEDKTKANAAGALSNLVRNSDKLCEDIVTKGAIQSLLKLISDCAVTALNPSRNDSANESPLKIALFSLAKMCAHPLCRRFIRSSPLFHVIGRLQQSPESSIAKYASVIINKVADS 1337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0970 1337 MobiDBLite consensus disorder prediction 281 341 - -
Lal1g0970 1337 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Lal1g0970 1337 Pfam Protein kinase domain 6 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0970 1337 ProSiteProfiles Protein kinase domain profile. 6 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0970 1337 Gene3D Transferase(Phosphotransferase) domain 1 2 312 - -
Lal1g0970 1337 ProSitePatterns Protein kinases ATP-binding region signature. 12 39 IPR017441 GO:0005524
Lal1g0970 1337 SUPERFAMILY Protein kinase-like (PK-like) 4 293 IPR011009 -
Lal1g0970 1337 Gene3D - 1065 1334 IPR011989 -
Lal1g0970 1337 PANTHER PROTEIN KINASE RELATED 1 1335 IPR045193 GO:0004674
Lal1g0970 1337 Coils Coil 1205 1225 - -
Lal1g0970 1337 CDD STKc_STK36 4 256 - -
Lal1g0970 1337 SMART arm_5 1200 1240 IPR000225 GO:0005515
Lal1g0970 1337 SMART arm_5 1241 1295 IPR000225 GO:0005515
Lal1g0970 1337 SMART arm_5 1117 1157 IPR000225 GO:0005515
Lal1g0970 1337 SUPERFAMILY ARM repeat 1087 1332 IPR016024 -
Lal1g0970 1337 SMART serkin_6 6 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0970 Lal-Chr1 7350501 7366373 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0970 1 245 AGC Kinase Gene Family AT3G08720 38.462 5.33e-46 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_Fused Lal1g0970 Pkinase 4.7e-78 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0970 K06228 - gmx:100792102 2178.67