Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0956 ATGTCGAATAGAGAGGCTACGACAGAAGATCATCAAGCAGTTACGAATGGTGATAGTGATGGATTAGAGAAAAATAAAATTATTGACATACACAATAGACTTCCAAATGAAATGATACCACAACTTGGGTTGGAATTTGAAACTGAAGATGTTGCTTATGATTTTTATAACTCTTATGCTTATAGAGTTGGTTTTAGTGTTAGGAAAAGTAAAGCACACAACAATGATGATGGTCACATAATTGATAGAGTATTTTGTTGTTCATGTGAAGGTTATCGTGAGAAGGATAAACGAAGTACTAGTGTGAATAATCCCCGTTCTCAATCAAGGTTTGGATGTTTGGCAAGAATGAAAGTAGATTGTCGTTCAACAGGAAAATTTTGTATTGTTCAATTTATTGCTGAACATAAGCATGAGACTTCTATCCCGAGCAAGACTCACCTTCATAGATCTCATAGGAAAATAACACCCTCTCTAGCATCTGAGATTGACTTAGCTAAAAGTTCTAGTATTGCTCCAAAAGCAAGTTGTGAATTAATGGCAAGAAGAGTCGGAGGACGTGAAAACTTGGGATTCATTCATGATGACTATAAAAATTATTTACGCTCAAAGCGAACAATTCAAATGAGATTAGGAGATACAGCTACAACAATGTCAGGAAAAAAGCCACAAACTATAATCACTGACCAAGATGCAGCAATGGCGAAGGCTCTAAGCTTGACATGGCCAGAGACATCCAACCGCCTTTGTATTTGGCACTTATACCAGAATGCTTTGAAGAATCTTAGTGTTGTATTTGGAGAGTTTCAAGACTTCAACAAGAACTTCAGCAAGTGCATATATGAGTATGAAGAAGAAGACAAGTTTATTAAAGCTTGGGATGATTTGCTAAACAACTATGGTCTTCGTGGAATTTTGTGCTCACATGCTCTCAAAGTTCTTTCAATAAGAAATATAATGAGGATTCCTATGATTTATGTGCTAAAGAGATGGACAAAGCAAGCAAAAATTGGAAGTGATAGAGGGACATGTCTTAGTCCTACTAATGATGATGAAAAGGCGGGATTGAGAAATCGCTACAAGGATTTATGTGGGCGATACACAGAATTAACAATAAAAGGTGCAACAAATGAAGAAATGTATAAAATTGCTGTCAATGCTTGGAATAAGGCTATGGAAGCTATAGATGCATGCATTGGAGGTGGAGAGAATGAGATATACACCCATGACACATCACCCATTGGTATTGAAAATGTTTTGTGCATTGAGAGTACTAATAATAAGGTGAAGGGAATCAAGACAAAAGGAAAACTTTGTGGATCATCTAGAAGGTCAAAAAGTATTCTTGAAAAAGGAAGAAAAAAAAACTTGTCTACAAGAAGATGA 1386 0.36 MSNREATTEDHQAVTNGDSDGLEKNKIIDIHNRLPNEMIPQLGLEFETEDVAYDFYNSYAYRVGFSVRKSKAHNNDDGHIIDRVFCCSCEGYREKDKRSTSVNNPRSQSRFGCLARMKVDCRSTGKFCIVQFIAEHKHETSIPSKTHLHRSHRKITPSLASEIDLAKSSSIAPKASCELMARRVGGRENLGFIHDDYKNYLRSKRTIQMRLGDTATTMSGKKPQTIITDQDAAMAKALSLTWPETSNRLCIWHLYQNALKNLSVVFGEFQDFNKNFSKCIYEYEEEDKFIKAWDDLLNNYGLRGILCSHALKVLSIRNIMRIPMIYVLKRWTKQAKIGSDRGTCLSPTNDDEKAGLRNRYKDLCGRYTELTIKGATNEEMYKIAVNAWNKAMEAIDACIGGGENEIYTHDTSPIGIENVLCIESTNNKVKGIKTKGKLCGSSRRSKSILEKGRKKNLSTRR 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0956 461 MobiDBLite consensus disorder prediction 437 461 - -
Lal1g0956 461 MobiDBLite consensus disorder prediction 1 19 - -
Lal1g0956 461 Pfam FAR1 DNA-binding domain 54 140 IPR004330 -
Lal1g0956 461 MobiDBLite consensus disorder prediction 1 21 - -
Lal1g0956 461 PANTHER OS03G0181600 PROTEIN 29 215 - -
Lal1g0956 461 PANTHER OS03G0181600 PROTEIN 304 403 - -
Lal1g0956 461 PANTHER OS03G0181600 PROTEIN 216 303 - -
Lal1g0956 461 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 304 403 IPR031052 GO:0006355
Lal1g0956 461 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 29 215 IPR031052 GO:0006355
Lal1g0956 461 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 216 303 IPR031052 GO:0006355
Lal1g0956 461 Pfam MULE transposase domain 212 257 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0956 Lal-Chr1 7129122 7131288 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal1g0956 FAR1 3.8e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0956 - K17604 lang:109359915 399.823