Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0894 ATGTTCCTCAAAACCCAATCTTTGTTCCTCACCTTTCTTTTCATCACCGCCGCCATCACCACCACCACCGTCTTCGCCGCCATCACCCCAGGTTCTACTCTCTCAGCCTCTAACATAAACCAAACATGGTCCTCACAAAGTTCCACTTTCTCTCTCGGCTTTGTCCCCTCCAACCCACCCACTACCCCTCCCACCTTCATCGCCGCCATCGTCTACTCCGGCGGCTCTCCCGTCGTTTGGTCTGCCGGAAACACCGCCGTTGACTCTTCTGGGTCGTTCCAATTCCTCCAATCAGGATCCCTCCGTTTGGTCAACGGCTCCGGCGCCACCGTATGGGACTCCGGCACCACCGGTGCCTCCTCTGCTACCCTGGAAGAAACCGGAAACCTTGTTCTATCAAACAGCACCGGGACAGTGTGGTCAACGTTTGACCAACCAACAGATACTATTTTACCTTCTCAGAATTTCAGTGTTGGTAATGCTCTCAGATCTGGTTCTTACTCTTTCAGTCTTCTGAATAATGGAAACTTAACTTTAAGGTGGAATGATAGTGTATTGTTCTATAATCAAGGGTTGAATTCTTCTGTTAATGTTAGTTTAAACAAACCTATGTTGAGTTTACAATCTATTGGGATTTTGCAACTTTCTGATGCAAAATTGAGTAGTCCTGTTGTTGTTGCTTATAGTAGTGACTATGCTGAGGGAAGTGATGTTTTGAGGGTTTTGAAATTGGATAAAGATGGGAACTTGAGGATTTATAGCACTTCTAAGGGTAGTGGAAGTTCTACTCCTAGATGGGCTGCTGTTCAGGATCAATGTGATGTTTATGCTTATTGTGGGAATTACGGTATTTGTAGTTATAATGATTCGAATCCGATTTGCGGTTGCCCATCTCAGAATTTTGAGATGGTTGATCCGAATGATAGTCGGAAAGGGTGTAGGAGGAAGGTGAGTCTTGATACTTGTCAAGGGAGTGCGACTATGTTGACAATGGATCATGCTCAGTTCTTGACTTATCCACCTGAGAGTGAATCACAGGCGTTTTTCATTGGTATATCGGCTTGTAGAGGGAATTGTCTTTCGGGATCTGGTGCTTGTTTTGCTTCTACTTCCTTGTCTGATGGCACGGGACAGTGTTATATAAAGTCGGAAGATTTTGTCAGTGGTTATCATAGTCCAGCATTGCCTAGTACTTCTTATGTTAAGGTTTGTCCACCAGTGGATCCAAATCCGCCACCCTCGTTAGGGGAGACCGTGAAGGAAAAGAGTACAGGTGTGCCGGCTTGGGTTGTTGTGGTTGTCATTTTTGGTACCCTTATAGGTTTGGTTGCCTTTGAAGGTGGGCTATGGATTTGGTGTTGTAAGAACAGCAAGAGGTTTGGTGGATTGCCTACTCAATATGCTCTTCTTGAGTATGCTTCTGGTGCGCCGGTTCAGTTTTCGTACAAGGAGCTTCAGCGCTCGACAAAAGGGTTCAAAGAGAAACTTGGAGCTGGTGGTTTTGGTGCCGTGTACAGAGGAGTTCTAGTGAATAAAACTGTTGTTGCAGTGAAGCAACTTGAGGGCATTGAGCAAGGTGAGAAACAGTTTAGGATGGAAGTTGCTACTATAAGTAGCACCCATCATCTGAATTTGGTGAGGCTCATCGGCTTTTGTTCGGAAGGACGCCACAGGCTTTTAGTTTATGAGTTCATGAAAAACAGTTCTCTTGATAATTGTCTGTTCTTGTCAGAAGAACATTCAGGAAAGTTGTTGAATTGGGAGCATCGATACAACATTGCCTTGGGCACTGCTAGGGGCATCGCATACCTTCACGAGGAATGTCGTGACTGCATTGTCCATTGCGATATAAAACCTGAAAACATTCTCTTGGATGGTAGTTACATTGCTAAAGTCTCAGATTTTGGCCTCGCCAAACTCGTAAATCCCAAGGACCACAGGCACCGAACCTTGACAAGTGTGCGAGGTACCAGAGGATATTTAGCTCCAGAGTGGATTGCAAATCTTCCTATAACATCAAAATCCGATGTTTACAGTTACGGCATGGTTTTGTTGGAGATTGTGAGCGGAAGGAGGAATTTTGATGTATCGGATGAAACAAATAGGAAAAAGTTCTCCACTTGGGCGTATGAAGAGTTCGAGAGAGGCAACATTGATGCAATTGTGGACAAAAGATTAGCTGATGAAGAAGTTGACATGGAGCAAGTTGGAAGAGCGATTCAAGCAAGCTTTTGGTGCATCCAAGAGCAGCCATCTCAAAGACCGATGATGAGCCGAGTGGTGCAAATGCTAGAAGGCGTAATGGAGATCGAGAAGCCACCTGCTCCAAAGTCAGTGATGGAATTACCTGTTAGTGGAACCAGCACATTCATAAGTAGCAATGCCAGTGCATTCTCGACCGTTGCAGCATCACCCCATGTTCCTTCATCGTCATCGTCGTTCCATATTAGTGGCGTTTCAACCTTTGCCTCGGGAAAGAACGCCGACAAAGCCACTTCATCCCTTTTACAATCAGTACCATGA 2523 0.4538 MFLKTQSLFLTFLFITAAITTTTVFAAITPGSTLSASNINQTWSSQSSTFSLGFVPSNPPTTPPTFIAAIVYSGGSPVVWSAGNTAVDSSGSFQFLQSGSLRLVNGSGATVWDSGTTGASSATLEETGNLVLSNSTGTVWSTFDQPTDTILPSQNFSVGNALRSGSYSFSLLNNGNLTLRWNDSVLFYNQGLNSSVNVSLNKPMLSLQSIGILQLSDAKLSSPVVVAYSSDYAEGSDVLRVLKLDKDGNLRIYSTSKGSGSSTPRWAAVQDQCDVYAYCGNYGICSYNDSNPICGCPSQNFEMVDPNDSRKGCRRKVSLDTCQGSATMLTMDHAQFLTYPPESESQAFFIGISACRGNCLSGSGACFASTSLSDGTGQCYIKSEDFVSGYHSPALPSTSYVKVCPPVDPNPPPSLGETVKEKSTGVPAWVVVVVIFGTLIGLVAFEGGLWIWCCKNSKRFGGLPTQYALLEYASGAPVQFSYKELQRSTKGFKEKLGAGGFGAVYRGVLVNKTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLIGFCSEGRHRLLVYEFMKNSSLDNCLFLSEEHSGKLLNWEHRYNIALGTARGIAYLHEECRDCIVHCDIKPENILLDGSYIAKVSDFGLAKLVNPKDHRHRTLTSVRGTRGYLAPEWIANLPITSKSDVYSYGMVLLEIVSGRRNFDVSDETNRKKFSTWAYEEFERGNIDAIVDKRLADEEVDMEQVGRAIQASFWCIQEQPSQRPMMSRVVQMLEGVMEIEKPPAPKSVMELPVSGTSTFISSNASAFSTVAASPHVPSSSSSFHISGVSTFASGKNADKATSSLLQSVP 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0894 840 SMART serkin_6 490 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0894 840 Gene3D Transferase(Phosphotransferase) domain 1 565 778 - -
Lal1g0894 840 ProSiteProfiles Bulb-type lectin domain profile. 25 145 IPR001480 -
Lal1g0894 840 PIRSF SRK 1 816 IPR024171 GO:0004674
Lal1g0894 840 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 191 IPR036426 -
Lal1g0894 840 ProSiteProfiles Protein kinase domain profile. 490 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0894 840 SUPERFAMILY Protein kinase-like (PK-like) 472 765 IPR011009 -
Lal1g0894 840 Gene3D Phosphorylase Kinase; domain 1 464 564 - -
Lal1g0894 840 Pfam S-locus glycoprotein domain 233 297 IPR000858 GO:0048544
Lal1g0894 840 SMART blect_4 34 146 IPR001480 -
Lal1g0894 840 ProSitePatterns Protein kinases ATP-binding region signature. 496 518 IPR017441 GO:0005524
Lal1g0894 840 Gene3D - 22 144 IPR036426 -
Lal1g0894 840 Pfam Protein kinase domain 493 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0894 840 Pfam D-mannose binding lectin 85 158 IPR001480 -
Lal1g0894 840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 612 624 IPR008271 GO:0004672|GO:0006468
Lal1g0894 840 PANTHER G-TYPE LECTIN S-RECEPTOR SERINE/THREONINE-PROTEIN KINASE 8 829 - -
Lal1g0894 840 PANTHER OS07G0415500 PROTEIN 8 829 - -
Lal1g0894 840 Gene3D - 146 269 IPR036426 -
Lal1g0894 840 ProSiteProfiles Bulb-type lectin domain profile. 147 265 IPR001480 -
Lal1g0894 840 CDD STKc_IRAK 496 766 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0894 Lal-Chr1 6390001 6392523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0894 463 774 Receptor kinase-like Gene Family AT5G20050 42.769 9.63e-80 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lal1g0894 Pkinase 4.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0894 - - gmx:100795819 1316.6