Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal1g0874 | ATGGAACAAGGAGAAGTTGCAATACAAGGTTCTTCTGTTGCTTCAGGTTATATCAGAGAAAGAGAGTACACAGAAATGGTTTCAGCTTTGACTCGTGTGGGGTCAGGATCAGGCCAGAGAAGAAGTGAATGGGTTCAGATTCATGGAAGTGGTGGTTCATTGGTTGGGCAAAAAAGAGAGCGTGAAGAAGAGAGTAGTGGTTCTCATCACTTCATGCAACAAGCTCTTCCTAGACACTTCAGAACCATTGGTCACTTCAGGATACCACTGACACAAACAGAGTTATCATCAGAAGAAGCTGCCACCACCATCATTACAACCACAACGGCGGCGACACCGTCGAGTGAAACGGCTTCAAATGAAGAGACAAGAGAGAGGAGAAGGTACAGGGGAGTGAGGCAGAGGCCATGGGGAAAATGGGCAGCAGAAATTCGTGATCCACACAAAGCAGCAAGAGTTTGGCTTGGTACATTTGACACAGCAGAAGCTGCAGCAAGAGCTTATGATGAAGCTGCATTAAGGTTCAGAGGCAACAAAGCAAAGCTAAATTTCCCTGAAAATGTTACAGCACTGCAACCACCACTTCACACTTTTCCGGCCACCACTAGGCTAGCGACACCGCCGCAATTGGCGCCGAGGCTCATGCAGCCGCAACAGGAGCCGTTACTTCAAGGGTCCTTTGATTTGATCAGAGATTATAGGGAATATTCTCAACTTCTTCAGAGTTCTGGTGATTTTCAACAACAACAATTACAACTACAACACCAACCTTCTAGTTTGTTGCAGCAATGGTACTATACTTCACAATTGGCTGAACTTCAATCATCTTCATTGTTATCATCATCTCCTTCTTTGTCTTCTTCTATGTCAGCAAATGCATCATTTTCACCATCCACTCAATTTTCCTCTGCTTCATTTCCCATGTATTCTACTCAACAAATGGGCAATTTCCGGCCACCGGGAAACCAAACTCAAGACGGCGGTGGAGGCACCAGATTGGAGTATCCTTCGTCAACTTGGTCAGATACCAGTGGCTATCCGCCACCTCCCAGTTGA | 1056 | 0.4593 | MEQGEVAIQGSSVASGYIREREYTEMVSALTRVGSGSGQRRSEWVQIHGSGGSLVGQKREREEESSGSHHFMQQALPRHFRTIGHFRIPLTQTELSSEEAATTIITTTTAATPSSETASNEETRERRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFPENVTALQPPLHTFPATTRLATPPQLAPRLMQPQQEPLLQGSFDLIRDYREYSQLLQSSGDFQQQQLQLQHQPSSLLQQWYYTSQLAELQSSSLLSSSPSLSSSMSANASFSPSTQFSSASFPMYSTQQMGNFRPPGNQTQDGGGGTRLEYPSSTWSDTSGYPPPPS | 351 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal1g0874 | 351 | SUPERFAMILY | DNA-binding domain | 128 | 186 | IPR016177 | GO:0003677 | |
Lal1g0874 | 351 | MobiDBLite | consensus disorder prediction | 310 | 351 | - | - | |
Lal1g0874 | 351 | ProSiteProfiles | AP2/ERF domain profile. | 128 | 185 | IPR001471 | GO:0003700|GO:0006355 | |
Lal1g0874 | 351 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110 | 20 | 312 | - | - | |
Lal1g0874 | 351 | Pfam | AP2 domain | 128 | 177 | IPR001471 | GO:0003700|GO:0006355 | |
Lal1g0874 | 351 | SMART | rav1_2 | 128 | 191 | IPR001471 | GO:0003700|GO:0006355 | |
Lal1g0874 | 351 | PRINTS | Ethylene responsive element binding protein signature | 129 | 140 | IPR001471 | GO:0003700|GO:0006355 | |
Lal1g0874 | 351 | PRINTS | Ethylene responsive element binding protein signature | 151 | 167 | IPR001471 | GO:0003700|GO:0006355 | |
Lal1g0874 | 351 | CDD | AP2 | 136 | 187 | IPR001471 | GO:0003700|GO:0006355 | |
Lal1g0874 | 351 | PANTHER | DNA-BINDING DOMAIN | 20 | 312 | IPR044808 | GO:0003700|GO:0009873 | |
Lal1g0874 | 351 | MobiDBLite | consensus disorder prediction | 310 | 342 | - | - | |
Lal1g0874 | 351 | MobiDBLite | consensus disorder prediction | 50 | 69 | - | - | |
Lal1g0874 | 351 | MobiDBLite | consensus disorder prediction | 109 | 130 | - | - | |
Lal1g0874 | 351 | Gene3D | AP2/ERF domain | 127 | 187 | IPR036955 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal1g0874 | Lal-Chr1 | 6159177 | 6161914 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal1g0874 | 114 | 202 | AP2-EREBP Transcription Factor Family | AT2G33710 | 66.292 | 9.76e-34 | 122 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Lal1g0874 | AP2 | 6.4e-15 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal1g0874 | - | - | gmx:100804843 | 270.781 |