Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0859 ATGGCATCCAATGACACATCCCTTAACCAAGCTAAATTTGTGCTTCCAAACAATGACCTTGAGCAACAAGAAACATCAACCCTAGAGATTGAATCCAAGGACTTTGACTACACAAAAAGATCTCAATGGTTACGCGCCGCGGTGTTAGGAGCCAATGATGGCTTGGTCTCCACAGCATCTTTGATGATGGGTGTTGGAGCAGTGAAGCATGATATCAAGGCCATGATCTTAACCGGTTTCGCGGGATTGGTGGCCGGAGCTTGTAGCATGGCAATAGGAGAGTTTGTCTCTGTGTACTCACAGTTAGACATAGAGGTTTCTCAAATGAAGAGAAACAATGAAAGGAAAGAACAAGAAAATACTGAACAAGTGGATATAGAAAGCTTGCCAAATCCTTTGCAAGCAGCAGCAGCATCAGCTTTGGCCTTTTCTGTTGGTGCAATGGTGCCATTGCTTGCAGCATCTTTTATAAGGGAATATAGGGTCAGGATTGGTGTGGTTCTGGCTGCAGTGACTTTTGCTTTGGTCATCTTTGGTTGCTTAGGGTCAGTGTTGGGTAAGGCTCCAGTTTTAAGGTCTGTTATGAGGATATTGGTTGGTGGTTGGTTAGCCATGGCCATTACTTTTGGTCTAACCATGTTGATTGGATATAGTGGCCTCTAG 663 0.4434 MASNDTSLNQAKFVLPNNDLEQQETSTLEIESKDFDYTKRSQWLRAAVLGANDGLVSTASLMMGVGAVKHDIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIEVSQMKRNNERKEQENTEQVDIESLPNPLQAAAASALAFSVGAMVPLLAASFIREYRVRIGVVLAAVTFALVIFGCLGSVLGKAPVLRSVMRILVGGWLAMAITFGLTMLIGYSGL 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0859 220 CDD Nodulin-21 42 189 - -
Lal1g0859 220 Coils Coil 99 119 - -
Lal1g0859 220 Pfam VIT family 127 212 IPR008217 GO:0005384|GO:0030026
Lal1g0859 220 Pfam VIT family 44 124 IPR008217 GO:0005384|GO:0030026
Lal1g0859 220 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 9 216 - -
Lal1g0859 220 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 9 216 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0859 Lal-Chr1 6033774 6034436 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0859 1 220 Nodulin-like Gene Family AT3G43660 64.091 1.53e-97 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0859 K22736 - pop:7492461 326.635