Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0855 ATGAAGATTATTGAAGGTTGTATGATGAGCTTTGAAAGAAATAAGCCTTATGTTGCAATGATATTTATTCAGTTTGTATATTCAGGCATGGCTTTGTTGTCTAAGGCTGCAATTTCCAAAGGAATGAGCTCTTATGTGTTTGTTGTTTATAGACAAGCCTTTGCAACACTTGCCTTATCTCCATTTGCTTACTTTGACAGGTTAACAGCGAGTTCAAACCTTTACTATGTCTCAATCAACTATACCACTGCAACATTTGCTGCTGCAGCTACAAACACTGTCCCTTCCATTACTTTTATCATGGCTGTTTTTATAAGGGTGGAAAGCATTTCCATAAACCATATCCATGGGGTGGCAAAAATTTTGGGTTCTATTATAAGCCTTGTTGGGGCAATAACACTTGCTTTAGTTAAAGGACCTTCTCTACTTCCAGAAAATCAGAAGTACATATCTCAATCATTAACAATGGTCCACTCCAAAGGGGATTATATTAAAGGCTCTCTCATGATGCTCTCAGCAAACACTTCTTGGTCCTTGTGGCTTATTTTGCAGGGATTTATTGTAAAGCAGTACCCAGCAAAATTTCGCCTCACTGCTATACAGTGCTTCTTCAGCTTCATACAGTCAGCTACTTTGGCTGCTACAATGGAGAGGAATCTTTCAGCATGGAGACTTGGATGGGATATTCATCTTCTTGCTGTGGCCTACTGCGGTGTAATAGTAACAGGTATTTGTTATTGGTTGCAAGTTTGCACTATAGAGAAGAAAGGCCCAGTTTTCACAGCAATGTTTGCACCTCTGTCTCTTATTATCACAGCAACAATATCAACACTCTTATGGAAAGAACCTCTTTATTGGGGAAGTATTGGTGGCACTATTCTATTGGTGGTTGGACTTTATAGTTTGTTGTGGGGGAAGAAGAAGGAAAATGCAAAAGTGGAAAACCATGAAGATGCACAGCCAAAAGAAGAAACCAGATTGGAATGCATTATACAAAACTGA 1002 0.3892 MKIIEGCMMSFERNKPYVAMIFIQFVYSGMALLSKAAISKGMSSYVFVVYRQAFATLALSPFAYFDRLTASSNLYYVSINYTTATFAAAATNTVPSITFIMAVFIRVESISINHIHGVAKILGSIISLVGAITLALVKGPSLLPENQKYISQSLTMVHSKGDYIKGSLMMLSANTSWSLWLILQGFIVKQYPAKFRLTAIQCFFSFIQSATLAATMERNLSAWRLGWDIHLLAVAYCGVIVTGICYWLQVCTIEKKGPVFTAMFAPLSLIITATISTLLWKEPLYWGSIGGTILLVVGLYSLLWGKKKENAKVENHEDAQPKEETRLECIIQN 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0855 333 PANTHER WAT1-RELATED PROTEIN 13 66 IPR030184 GO:0016021|GO:0022857
Lal1g0855 333 PANTHER WAT1-RELATED PROTEIN 68 314 IPR030184 GO:0016021|GO:0022857
Lal1g0855 333 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 128 - -
Lal1g0855 333 Pfam EamA-like transporter family 165 303 IPR000620 GO:0016020|GO:0016021
Lal1g0855 333 PANTHER WAT1-RELATED PROTEIN 68 314 - -
Lal1g0855 333 PANTHER WAT1-RELATED PROTEIN 13 66 - -
Lal1g0855 333 SUPERFAMILY Multidrug resistance efflux transporter EmrE 227 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0855 Lal-Chr1 5986366 5992015 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0855 1 326 Nodulin-like Gene Family AT5G07050 33.425 4.77e-74 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0855 - - gmx:100800562 490.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0855 1 5986366 5992015 Lal1g0855 1 5986366 5992015 ECH