Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0844 ATGGCAGAAGAGGTTTTGAAGAAGGAAGAATCTCTTAACCTAAAAATCACAAGCAAAAGCCATGTGAAGCCTGAAAAGAATATTGGGAGGAAAGAGTATCAACTAGTAACTTTTGATCTTCCTTATCTTGCTTTTTACTACAACCAGAAGATACTTATTTACAAGGGTGAAGGTGGTGACTTTGAAGGAATGGTTAAGAAAGTGAAAGATGGGCTTAGTATAGTGCTAGAAGAGTTTCATCAACTAGCTGGTAAGATAGGAAAAGATGAAGAAGGAGTGTTCAAAGTGGAATATGATGATGACATGCAAGGTGTGGAAGTAACTGAAGCAATAGTACTTGGTGATGAGATTGGTGTAGAAGATCTAACTGTGGCTGAGACCACTGAGATCTTGAAGGACCTTATACCTTATAGTGGAGTCTTGAATTTGGAAGGCATGCATAGACCCTTGCTGGCAATTCAGTTAACGAAGCTCAAAGACGGGCTCGCAATGGGCTGCGCCTTCAACCATGCTGTCCTTGACGGGACCTCCACGTGGCAATTCATGACGTCATGGGCCGAAATCTGTAGCGGGTCACCCTCCACATCAGCCTCACCTTTCCTTGACCGGACCAAGGCCCGAAACACACGTGTGAAGCTTGATGTCTCCCTCCCTGAGCCCAAGGCCCAACCCAATGGTGATGCAAAACACGAGCCCATGCTTAGGGAAAAGATCTTTAAGTTCTCTGAATCCACCATCGACAAGATCAAGTCAACGGTCAACGAAAACTCTTCCTTGGATGGTTCAAAACCATTTTCAACATTTCAAGCTCTCTCTACTCATATATGGCATCATGTAACCCATGCACGTGACCTAAAGCCCGAAGACTACACCGTTTTTACTGTCTTTGTGGATTGTCGAAAACGGGTTAACCCACCTATGCCTGAAGCATATTTTGGAAACCTAATCCAAGCAATATTCACTGTAACAGCGGCTGGGCTATTACTAGCCCAGCCACCGCAATTTGGGGCATCTTTGATCCAAAAAGCGATTGTAGCACACGATGCTAAAGCCATCGATGAACGTAACAAAGAGTGGGAGAGTTTACCAAAGATTTTTCAATTTAAAGATGCCGGGGTGAATTGTGTAGCAGTTGGAAGCTCACCAAGGTTTAAGGTTTATGACATTGATTTTGGATGGGGAAAGCCTGAGAATGTGAGGAGTGGGAGTAATAACAAGTTTGATGGGATGATTTATTTGTATCCTGGGAAGAATGGAGGGAGAAGCATTGATGTGGAACTAACTTTGAAGCCTGAAGCTATGGCTAGGTTGGAACAAGACAAGGAGTTTCTTATGGAGGTTTAG 1344 0.4375 MAEEVLKKEESLNLKITSKSHVKPEKNIGRKEYQLVTFDLPYLAFYYNQKILIYKGEGGDFEGMVKKVKDGLSIVLEEFHQLAGKIGKDEEGVFKVEYDDDMQGVEVTEAIVLGDEIGVEDLTVAETTEILKDLIPYSGVLNLEGMHRPLLAIQLTKLKDGLAMGCAFNHAVLDGTSTWQFMTSWAEICSGSPSTSASPFLDRTKARNTRVKLDVSLPEPKAQPNGDAKHEPMLREKIFKFSESTIDKIKSTVNENSSLDGSKPFSTFQALSTHIWHHVTHARDLKPEDYTVFTVFVDCRKRVNPPMPEAYFGNLIQAIFTVTAAGLLLAQPPQFGASLIQKAIVAHDAKAIDERNKEWESLPKIFQFKDAGVNCVAVGSSPRFKVYDIDFGWGKPENVRSGSNNKFDGMIYLYPGKNGGRSIDVELTLKPEAMARLEQDKEFLMEV 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0844 447 PANTHER BAHD ACYLTRANSFERASE DCR-RELATED 16 443 - -
Lal1g0844 447 Pfam Transferase family 14 443 - -
Lal1g0844 447 Gene3D - 9 217 IPR023213 -
Lal1g0844 447 Gene3D - 218 440 IPR023213 -
Lal1g0844 447 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 16 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0844 Lal-Chr1 5850279 5854459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0844 46 447 Monolignol Biosynthesis Gene Families AT5G48930 25.761 3.70e-34 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0844 K19747 - gmx:100790669 761.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0844 1 5850279 5854459 Lal1g0844 1 5850279 5854459 ECH
Lal2g0932 2 6276946 6280342 Lal1g0844 1 5850279 5854459 LSH