Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0840 ATGGCTTCGAACCAATTCGATCGCACCAAGTTGAACCCGGTTCGTAAGGTTAGGCTTGTGGCTAAAGTCCGCGGGGTTTGGGGACCGGTGGCTGAGCCTTCTAGAACGGTGGACTGGGTTTCGGTGAACAAGCCACAAGGGGAAAACTCGGAGGGTGTCGCTATTTCATTCGGTGAACAATCTTCTAGTCAGTACTTGGTGGACTATTGCTATGAAGAGCATGAAGAAAATGAAGTCATATATATAAGAGAGGTGAAGCCACTTATATCAGCAGTTTTTGAAGGTCATAACAGCACTGTTATTGCATATGGAGCCAGAGGTAGTGGAAAGACTCACCTAATTCAGGGTTCTGATGAGAAACCGGGTTTGGCAGCTCTTTCAATCTCTGAGTTTCTTTCAATGGCTGAGAAAATTGGAAAATGTATAGCTCTTTCTTTCTATGAAGTTGATCATCAGGAGCATGCTGTTGACTTATTAAATCTAGGACAACCACCAATTTCGGTTTTCGAAGATCGTGGCAGAATTCAATTCAAAGGACTTACTCAGACTCCGGTGAAATCTATTGCCGAGTTTCAGAATTTGTACTTCACTGCATGTTCTGCACGAAAAGCAACTCCAAAAAAAGGCTGTGAACATGCTTGTAGAAGCCACATGGGATTAACAGTACATGTCTTTTCCCAGAATGAAACTCTAGAAACTGGTCTTGTGAGCAAAATGAATTTTGTTGATTTGGCAGGTTATGAAGATGCTAGAAAGAAAAGTATTGATGTCTCTTGCCATGCTGAGATTAACAAGATTAACAAGTCTATTTATGCCTTGCTGAATGTTTGTCATTCTTTGAGTACCAATGATAATTGGGTTCCGTATCGTGAAAGCAAACTTACACGCATATTGCAGGATACATTGAGGGGGACAAGCAAAACTTTGATGGTTGCCTGTTTGAACCCATCATTTTGCCAAGACACTATTTACATGGTAAGCTTAGCATCACGATCATGCCAATGGAAACATAAGACACCCTTGGAGTCCACAAAGAAGAATGAAAGTTCAATAAATAAAGCAACAACTTCTCAAAAGAGCAAGATAAACAAAAGTATGTCAACATGCTTGGAGTCCACAGAGAAAAATGAAAGTTCAACAAACAAGGCGTCGGCTTTACAAAAGAGCCAGATGAATAAAAGTACTCCAACACCTTTGGAGTCCACAAAGAGAAATGAAAGTTCAACAAACAAGGTAGCAACTTCTCAAAAGAGTCAGATAAACAGAAGTATTCCAACACCCTTAAAATCTACAAAGAAAAATGAAAGTTCAGCGAACAAGATGGTGACACCTCAAAGGAACCAGCTAAATAAAAGTATTTCAGCACCCTTAGATTCTGCAAAGAAAAATGAAAGTTCAGCAAAAAAGGTTGTGACTTCTCATAAGATCCTAAAACCCAAAAGTATTTCAACAACAAAGAGATTACCTGGCTCCAGGTCAAATGTATATGAAAAGAAATGTGTTTTAGCGAAGCCTGCAACCAAAGGAAGAAAATTATTTGATGAAGTCAACCATTTTGCTAAAGCTGATCAGGCAATGCCCTTATCTGCCATGGGTTCAACCTCTGAGACTTCAATGCTGGAAGAGGATAATTCTCTTCCTGATGCCAGTTCTAACGTGAAACTCAATGTGGTGGTGGAAGAGGATCACTCGCCTTTGAATGCTAATGCCGAACTGGAACTCTATCCCATAGTGGAAAAAGGAATTTTTGCGGATGGAGATCATCAAGAGAATCATACCCCTTACGAGGATACATACTCTGAAGTTCAAGAAGGCCGGAGCACAAAGAATAATAGTTTAATGTCAATTGAAGTTGGTTCACCACCCATTAGTTCTCAGCTGCGTGATTTGTCTAACAGTCTTAAGTTGCTCTATTCGTTAACTCCTTTATCCGTGCAAATACCAGAAAATGAATGCAATTCACTTAGTGATCAGATCTCTACTGATATTGTGGAACTAAAAGCTCCATTAACCGATCAGATTTCTAATGATATTGTGGAACCAAAAACTCCTATAACTGAACAAAATATGAGAGTTAATGATAGATGGGATGTAATGAATGCCAAAAGTCCTTGGGAAGCATTCAGCGTGAGAGGTTCTGGAATGAAGAATTCTCTTGTGCAAGAATATCTTAAGCTTCTAAACACAGCTGACAAGGAGGATTTGAAAAAGTTGAAGGGAATAGGAGAAAAGAGAGCAACTTATATACTTGAGCTTCGTCAAGAATCTCCAGAATATTTCAAGAGTCTTGATGATTTAAAGGACGTTGGACTTTCAGCAAAACAGATTAAGGAACTCGTGAAAAAGGAAGTAGGAGAACTTTTTAGCTAG 2370 0.3949 MASNQFDRTKLNPVRKVRLVAKVRGVWGPVAEPSRTVDWVSVNKPQGENSEGVAISFGEQSSSQYLVDYCYEEHEENEVIYIREVKPLISAVFEGHNSTVIAYGARGSGKTHLIQGSDEKPGLAALSISEFLSMAEKIGKCIALSFYEVDHQEHAVDLLNLGQPPISVFEDRGRIQFKGLTQTPVKSIAEFQNLYFTACSARKATPKKGCEHACRSHMGLTVHVFSQNETLETGLVSKMNFVDLAGYEDARKKSIDVSCHAEINKINKSIYALLNVCHSLSTNDNWVPYRESKLTRILQDTLRGTSKTLMVACLNPSFCQDTIYMVSLASRSCQWKHKTPLESTKKNESSINKATTSQKSKINKSMSTCLESTEKNESSTNKASALQKSQMNKSTPTPLESTKRNESSTNKVATSQKSQINRSIPTPLKSTKKNESSANKMVTPQRNQLNKSISAPLDSAKKNESSAKKVVTSHKILKPKSISTTKRLPGSRSNVYEKKCVLAKPATKGRKLFDEVNHFAKADQAMPLSAMGSTSETSMLEEDNSLPDASSNVKLNVVVEEDHSPLNANAELELYPIVEKGIFADGDHQENHTPYEDTYSEVQEGRSTKNNSLMSIEVGSPPISSQLRDLSNSLKLLYSLTPLSVQIPENECNSLSDQISTDIVELKAPLTDQISNDIVEPKTPITEQNMRVNDRWDVMNAKSPWEAFSVRGSGMKNSLVQEYLKLLNTADKEDLKKLKGIGEKRATYILELRQESPEYFKSLDDLKDVGLSAKQIKELVKKEVGELFS 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0840 789 PANTHER KINESIN-LIKE PROTEIN KIN-10C 16 666 - -
Lal1g0840 789 PANTHER KINESIN-LIKE PROTEIN KIN-10C 659 784 - -
Lal1g0840 789 Gene3D - 715 787 - -
Lal1g0840 789 SUPERFAMILY RuvA domain 2-like 718 782 IPR010994 -
Lal1g0840 789 Pfam Kinesin motor domain 40 331 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal1g0840 789 ProSiteProfiles Kinesin motor domain profile. 16 335 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal1g0840 789 PRINTS Kinesin heavy chain signature 95 116 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal1g0840 789 PRINTS Kinesin heavy chain signature 207 224 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal1g0840 789 PRINTS Kinesin heavy chain signature 238 256 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal1g0840 789 PRINTS Kinesin heavy chain signature 287 308 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal1g0840 789 SMART kinesin_4 14 343 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal1g0840 789 MobiDBLite consensus disorder prediction 337 451 - -
Lal1g0840 789 PANTHER KINESIN-RELATED 659 784 IPR027640 GO:0003777|GO:0007018
Lal1g0840 789 PANTHER KINESIN-RELATED 16 666 IPR027640 GO:0003777|GO:0007018
Lal1g0840 789 MobiDBLite consensus disorder prediction 345 451 - -
Lal1g0840 789 Gene3D Kinesin motor domain 15 378 IPR036961 -
Lal1g0840 789 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 343 IPR027417 -
Lal1g0840 789 Pfam Helix-hairpin-helix motif 727 779 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0840 Lal-Chr1 5822962 5828608 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0840 36 317 Calmodulin-binding Proteins AT5G65930 28.966 3.35e-27 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0840 K10403 - gmx:100809612 731.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0840 1 5822962 5828608 Lal1g0840 1 5822962 5828608 ECH