Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0839 ATGGCTCCGAAGCAGCCAAGTACGGGTATATTCGTTGGATTGAACAAGGGTCACGTTGTTACCAAGAGAGAGCTTCCTCCTCGCCCCTCTGATCGTAAGGGTAAAACAAGCAAGCGGGTGCACTTTGTGAAGAACCTCATTCGTGAAGTTGCTGGATTTGCACCTTATGAAAAGCGTATAACTGAGTTGCTGAAGGTTGGAAAAGATAAGAGGGCATTGAAAGTTGCCAAGAGAAAGCTCGGAACCCACAAACGTGCAAAAAGGAAGAGAGAGGAGATGTCAAACGTTCTCCGAAAGCTGAGGGCTGGTGGTGGAGCTGGTGATAAGAAGAAGTAA 336 0.4732 MAPKQPSTGIFVGLNKGHVVTKRELPPRPSDRKGKTSKRVHFVKNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSNVLRKLRAGGGAGDKKK 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0839 111 MobiDBLite consensus disorder prediction 87 111 - -
Lal1g0839 111 Coils Coil 83 103 - -
Lal1g0839 111 PANTHER 60S RIBOSOMAL PROTEIN L36-1-RELATED 1 110 - -
Lal1g0839 111 Pfam Ribosomal protein L36e 8 101 IPR000509 GO:0003735|GO:0005840|GO:0006412
Lal1g0839 111 PANTHER 60S RIBOSOMAL PROTEIN L36 1 110 IPR000509 GO:0003735|GO:0005840|GO:0006412
Lal1g0839 111 ProSitePatterns Ribosomal protein L36e signature. 55 65 IPR000509 GO:0003735|GO:0005840|GO:0006412
Lal1g0839 111 MobiDBLite consensus disorder prediction 79 111 - -
Lal1g0839 111 Gene3D 60S ribosomal protein L36 1 104 IPR038097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0839 Lal-Chr1 5817379 5819353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0839 7 111 Cytoplasmic Ribosomal Protein Gene Family AT5G02450 83.962 3.66e-58 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0839 K02920 - gmx:100526979 208.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0839 1 5817379 5819353 Lal2g0926 2 6228239 6229901 ECH
Lal1g0839 1 5817379 5819353 Lal1g0839 1 5817379 5819353 ECH