Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0817 ATGGTACAACTCAACTACTTCCATTTCACTCACCTCACATGTCTTTACCTCTTTCTCCTTCTCTTTTTACATGTAGCTTATGCACAAATATCAACACAACCACTTCCTACATACCTTCATCATAATTGGGAACCTTCTTTTGCAATCACAACTGGAGCAGTTATCTGTGCTCTTCTCTTGTTAGGATTGATCTATGTCTACATGAGAAAATGCACAGAATCACAATACAACACTCGAACCAATAACACATCACAAAGGCCATGTTCTTGTTCACAAGGTATCAACAAGGAACTTCTCAACACATTCCCGATCCTATTCTATTCCACCATCAAGGATCTCAAGAGGGGAAAAGGGTCACTTGAATGTGCTGTTTGCTTGAATGATTTCAAAGACTATGATTCCCTTAGGTTGCTTCCAAAATGCAACCACGTGTTTCACCCTTCATGTATACATTCTTGGCTATGCTCCCATGTGACATGCCCAGTTTGTCGTGCAGATTTGAACGATTCATGTGAAGTTTCCATAACGGTGGAATCCCATTTGAGCACTCCCCAAAGGGTGCCAGAAAATCCAAGCTTTTTAGCAGAACAAGTTGATGGTGAAGAGAACAACAACAACAACAACCCAATAGAGCAAAACGCAAACCAAGTTGTGAGTAACTTAAAGGAATGTGAGGGTAACAATGATTTTGGTTCATCAAAGTTGAAGCTTTTGAGGTCAAATTCAACAGGTCATTCAGTTCTGGAATCAGGAAAAAATATGGAAAGGTACACACTTATGTTGCCAGAGGATATAAGGAAGTACATTCTTGTGAACCATAACCAACATGGAAGAAGGGTTCAGCGTTCAGCTAGCTACAACAACGATGTTATGATGCCAGTGTCGGAGAGTTCGAGGAAATGTTGGAGTTACAGTGAAGAATACAAAAACATGAGGATGTCTTTTACGCCGCCAATTGTTGCAAGCCGTGGTTAA 975 0.4051 MVQLNYFHFTHLTCLYLFLLLFLHVAYAQISTQPLPTYLHHNWEPSFAITTGAVICALLLLGLIYVYMRKCTESQYNTRTNNTSQRPCSCSQGINKELLNTFPILFYSTIKDLKRGKGSLECAVCLNDFKDYDSLRLLPKCNHVFHPSCIHSWLCSHVTCPVCRADLNDSCEVSITVESHLSTPQRVPENPSFLAEQVDGEENNNNNNPIEQNANQVVSNLKECEGNNDFGSSKLKLLRSNSTGHSVLESGKNMERYTLMLPEDIRKYILVNHNQHGRRVQRSASYNNDVMMPVSESSRKCWSYSEEYKNMRMSFTPPIVASRG 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0817 324 SMART ring_2 122 163 IPR001841 -
Lal1g0817 324 CDD RING-H2_EL5_like 121 164 - -
Lal1g0817 324 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 72 170 IPR013083 -
Lal1g0817 324 SUPERFAMILY RING/U-box 121 168 - -
Lal1g0817 324 ProSiteProfiles Zinc finger RING-type profile. 122 164 IPR001841 -
Lal1g0817 324 Pfam Ring finger domain 121 164 IPR001841 -
Lal1g0817 324 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 5 209 - -
Lal1g0817 324 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 213 294 - -
Lal1g0817 324 PANTHER RING FINGER DOMAIN-CONTAINING 213 294 - -
Lal1g0817 324 PANTHER RING FINGER DOMAIN-CONTAINING 5 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0817 Lal-Chr1 5625703 5626677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0817 17 300 Rapid Response to Elicitors AT3G05200 34.983 4.18e-51 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0817 K10664 - gmx:100782532 270.396