Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0811 ATGGAAGGTAGCAATGACTTGAGTCTTCTTGGTGAGAACTTTGGCTTAGGAGTGGTTAAGGATGATGACAATGAAAGCCGATCCGGAAGTGACAATCTTGATGGTGTATCTGGTGATGACCAAGATTTCGGCGAGGAGACGTCTCGGTCTCAGAGGAGGAGGAAGTATCATAGGCATACTCCTCAACAAATTCAGGAGCTTGAAACATTCTTCAAGGAGTGCCCACACCCCGACGAAAAGCAGAGAACTGAACTTGGCCATAGGCTTGGCTTGGCCAACAAGCAAGTGAAGTTCTGGTTTCAGAATAGGCGCACTCAAATGAAGACTCAATTGGAGCGCCATGAGAACATGATGCTCAGGCAGGAGAATGAGAAGCTTCTAGCCGAGAATAGTTTGATGAAAGAGGCAATGGCAAACCCGGTGTGTCAAACATGTGGTGGCCCAGCCCTCCCTGGTCAGATTTCATTTGATGAGCACCAAGTTGGGATCGAAAATGGTCGACTTAAGGATGAGTTGACCCGCATATGTGCCTTAGCAAACAAGTTCATTGGAAGAGCACTCTCACCATTAGTTGGTCCCGCGGCTCTTCAGTCCCCAAATTCTGGTCTAGACCTTGCTATTGGAATGAATGGATTTGCTGGTCCAAGCAATCATGGCATGATGTCGTTGCCAATGGGGCTTGACTTTGGAGAAGGACTTTTGAACAATCCACCTGCCATGAATGGGATTATTAGATCACCACCAATTGGACAAACGGGAAATCAAATACCGAATGAGAGAGCGATGCTTATAGAAGTTGCAATGGTTGCTATGGAAGAATTGATTAAGATGGCTCAGCTAGATAGCCCTCTATGGCTTAAGAGTTCAGATGGCAGGAGTGAAGTACTGAACCATGAGGAGTATGCAAGGATTATGATTCCTCCTTGTATTGGTCCAAAACCCAATGGTTATGTGACTGAAGCTACCAGAGAATCTGGTTTACTGATAGGCAATTGTCTAGGCCTTGTGGAAATATTGATGAATGCGGATCAATGGTCAGAGATTTTTCCCTCTGCAGTTGCGAGAGCTGTCACTCTCGAAGCAGTATCCACCGGTGTACCCGGCAATAGAAATGGAGCTATACATGTGATACACGCCGAGGTTCAATTGCCTTCGCCGCTCGTCCCGGTTCGTCAATTGACCTTCATCAGGTATTGCAAGCAGCATGGTGAAGGTTTATGGGCAGTTGTTGATGTTTCAGTTGACATTGGTCAAAATTCTGCCAATTTTGCACACCCAATTATGAACTGCAGGAGGCTCCCTTCTGGATGCATTCTGCAAGACACATCCAATGGCCTTTTCAAGGCAATTACATTGTTACAGGTGACTTGGGTAGAGCATAACCAATATGACGAAAGCGCGATTCATCAGCTCTATCGTCCGTTGATTAATTCTGGAATTGGCTACGGTGCTCAAAGATGGATTGCCTCTCTCCGGAGGCAATTCGAATGCTTGGCAACTCTCGTACCCCCTCCCTTACCAACTGAGGACCCCACAGGCATGACCCTAGCTGGTAAAAGAAACATGGTGAAGCTCGCGCAGCGCATAACCAATAAATTCTTCAGTGGTTTATGTTTTTCGGCTGCGCACCAATGGGAGCCTCTTCACTTTGATGTTATGGATCCTAACATTAAAGTGATGGCCAGGAAAAGTGTGGTTGGTGAGCCATCTGGCATTGTGTTGAGTGCTGCTACCTCTGTTTGGATGCCTATTTCGCAGCAGAGGTTGTTCGATTTCCTGCACGACCAACGATTGAGAGGCGAGTGGGATGTCTTGGCCAACAATCTACCAATGCAAGAGTTGCTCCGTATTTCCAAGGGACAAGTAAATGGAAATTGTGTCTCTGTCCTTCGCAATGGTCCAAATGGCTTGGAGAGTGGCATGCTGGTTCTACAAGATGCATGGACTGATAACTCTTCATCAGTGATGGTTTATGTAGCAGTGGATATGGATTCCTTGAACTTGGTAATGAGTGGTGGAGAATCTACATATCTTCATCTATTGCCTTCAGGCTTTATTATTCATCCAGATGGTCGTTCAAACAATGGCAGCGGCGGTGGCGGTGGCGGTGGTGGCAGTGAAAGTGGTGGTAGCTTGCTTACATTTGGGCTACAAATATTATTGAGTAGCCTCCCAAATGCTAATAACCTGTCAATGGAGTCAGTTGTTTCTGTCAGCAACCTCATCACAGAGAGCATTCAGAAGATTAAGGTTGCACTTAGAGTTGCATAA 2271 0.4628 MEGSNDLSLLGENFGLGVVKDDDNESRSGSDNLDGVSGDDQDFGEETSRSQRRRKYHRHTPQQIQELETFFKECPHPDEKQRTELGHRLGLANKQVKFWFQNRRTQMKTQLERHENMMLRQENEKLLAENSLMKEAMANPVCQTCGGPALPGQISFDEHQVGIENGRLKDELTRICALANKFIGRALSPLVGPAALQSPNSGLDLAIGMNGFAGPSNHGMMSLPMGLDFGEGLLNNPPAMNGIIRSPPIGQTGNQIPNERAMLIEVAMVAMEELIKMAQLDSPLWLKSSDGRSEVLNHEEYARIMIPPCIGPKPNGYVTEATRESGLLIGNCLGLVEILMNADQWSEIFPSAVARAVTLEAVSTGVPGNRNGAIHVIHAEVQLPSPLVPVRQLTFIRYCKQHGEGLWAVVDVSVDIGQNSANFAHPIMNCRRLPSGCILQDTSNGLFKAITLLQVTWVEHNQYDESAIHQLYRPLINSGIGYGAQRWIASLRRQFECLATLVPPPLPTEDPTGMTLAGKRNMVKLAQRITNKFFSGLCFSAAHQWEPLHFDVMDPNIKVMARKSVVGEPSGIVLSAATSVWMPISQQRLFDFLHDQRLRGEWDVLANNLPMQELLRISKGQVNGNCVSVLRNGPNGLESGMLVLQDAWTDNSSSVMVYVAVDMDSLNLVMSGGESTYLHLLPSGFIIHPDGRSNNGSGGGGGGGGSESGGSLLTFGLQILLSSLPNANNLSMESVVSVSNLITESIQKIKVALRVA 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0811 756 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 17 754 IPR042160 -
Lal1g0811 756 CDD homeodomain 53 110 IPR001356 GO:0003677
Lal1g0811 756 Pfam START domain 267 496 IPR002913 GO:0008289
Lal1g0811 756 SUPERFAMILY Bet v1-like 518 721 - -
Lal1g0811 756 Gene3D - 40 128 - -
Lal1g0811 756 ProSiteProfiles START domain profile. 256 500 IPR002913 GO:0008289
Lal1g0811 756 SUPERFAMILY Bet v1-like 259 498 - -
Lal1g0811 756 CDD START_ArGLABRA2_like 260 496 - -
Lal1g0811 756 SMART START_1 265 497 IPR002913 GO:0008289
Lal1g0811 756 SUPERFAMILY Homeodomain-like 43 110 IPR009057 -
Lal1g0811 756 Coils Coil 104 136 - -
Lal1g0811 756 MobiDBLite consensus disorder prediction 16 61 - -
Lal1g0811 756 ProSiteProfiles 'Homeobox' domain profile. 50 110 IPR001356 GO:0003677
Lal1g0811 756 SMART HOX_1 52 114 IPR001356 GO:0003677
Lal1g0811 756 Pfam Homeodomain 53 108 IPR001356 GO:0003677
Lal1g0811 756 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 17 754 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0811 Lal-Chr1 5578861 5582099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0811 2 753 Homeobox Transcription Factor Family AT3G61150 47.532 0.0 700
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lal1g0811 START 1.3e-41 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0811 K09338 - gmx:100794400 930.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0811 1 5578861 5582099 Lal2g0905 2 6027793 6031283 ECH
Lal1g0811 1 5578861 5582099 Lal1g0811 1 5578861 5582099 ECH