Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0810 ATGGACTTTCTCCGCCGTCTCTTCGGCGGAAAGAAACACCCACCAGGTGCTTCTGCTGACGTGTCTAGACCAAAACCCAACAAGTACAAGAAGAAGAAACACACAACTAAGGGCAACTACAATAACCACAACCACTTTGACCCATCTGTTTCATCCTTGGACGCTAACAATCATGCCATCGCCGTCGCCGCCGCTACGGCCGCCGTAGCTGAGGCTGCACTTGCAGCTGCGCATGCAGCTGCTAAGGTTGTCAGACTAACCAGCGGAAGCGGGTCTGGTTCGAGTAGGAGGTCCACGGCGGCAGCCCATGGTCAGCGGCTGTTGGTGGTGGAAACCGCCGCCGTGAAAATACAGTCAGCGTTCCGTGGTTACTTGGCAAGGAGGGCACTGAGAGCACTTAAAGCATTAGTGAAGTTGCAAGCATTGGTGAGGGGCAATATTGTAAGAAAGCAAACTTCTGATATGCTTAGGCGCATGCAAACATTGGTGCGACTGCAGACCCGGGCACGTGCAAGCCGTATGCATTTGTCAAATAATATGCATTCTTACAAGTCCTCACTCTCTCATTACCCTGTCCATGAAGATTATGAGCATTCACTTCGTGTGAATAGTACAAAATTTGATGGATCTTCTATCCTCAAGAGATGCAGTTCGAATGCAAATTTTAGGGACACCGACTTGGAGAGAGCCCGATTTGGTTCTAATTGGTTAGACAGTTGGATGGAAGAAAGTGCACAAAACCAAACCGGGGATGCTCCATTGAAAAATTTGCATAATGATGATGAGAAAAGTGACAAGATTCTTGAAGTAGATACTTGGAAGCCACACTTGAAATCTCACCATGGTAGCAGCAGCTCTTTTCAGACACCACATTATTTACATACTCATTACAACAATGAGAATTTTACGGCATATGACTCCCCGTCGAAACATTCGTTGAAGACTCCAAGTCCAAGCCTCTCATCTAGAAAAGAAGCAGCTCCAAGAACTTCTGAGAATAGTCCACTAGCATTTTCTACTTCGTCTAGGCTTGGAAGTGGATCAAGGAAGGGACCCTTTACACCGACTAAGAGCGAGTGTTCGTGGGGTTTCTTGGGTGGCTACTCGAGTCATCCTAATTACATGGCATATACTGAATCTTCTAGAGCTAAGGTAAGGTCACAAAGTGCCCCAAGGCAAAGGCTGGAGTTTGAGAGATATGGTTCCGGTTCCGTTAGTTCTTCGATTCAGGGTCATTGGGATAATGCAGGGCTTAACTCAGATAGAGATTCTGATTTCAAGAGCAAAGCCTATTCAACTTCAAGTCACTTGAGCAGAATTGGGAGCACCAAATTAAGGTGA 1341 0.4668 MDFLRRLFGGKKHPPGASADVSRPKPNKYKKKKHTTKGNYNNHNHFDPSVSSLDANNHAIAVAAATAAVAEAALAAAHAAAKVVRLTSGSGSGSSRRSTAAAHGQRLLVVETAAVKIQSAFRGYLARRALRALKALVKLQALVRGNIVRKQTSDMLRRMQTLVRLQTRARASRMHLSNNMHSYKSSLSHYPVHEDYEHSLRVNSTKFDGSSILKRCSSNANFRDTDLERARFGSNWLDSWMEESAQNQTGDAPLKNLHNDDEKSDKILEVDTWKPHLKSHHGSSSSFQTPHYLHTHYNNENFTAYDSPSKHSLKTPSPSLSSRKEAAPRTSENSPLAFSTSSRLGSGSRKGPFTPTKSECSWGFLGGYSSHPNYMAYTESSRAKVRSQSAPRQRLEFERYGSGSVSSSIQGHWDNAGLNSDRDSDFKSKAYSTSSHLSRIGSTKLR 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0810 446 MobiDBLite consensus disorder prediction 430 446 - -
Lal1g0810 446 Pfam Protein of unknown function (DUF4005) 317 400 IPR025064 -
Lal1g0810 446 SMART iq_5 109 131 IPR000048 GO:0005515
Lal1g0810 446 SMART iq_5 132 153 IPR000048 GO:0005515
Lal1g0810 446 MobiDBLite consensus disorder prediction 400 417 - -
Lal1g0810 446 Pfam IQ calmodulin-binding motif 113 131 IPR000048 GO:0005515
Lal1g0810 446 Pfam IQ calmodulin-binding motif 134 151 IPR000048 GO:0005515
Lal1g0810 446 MobiDBLite consensus disorder prediction 1 48 - -
Lal1g0810 446 MobiDBLite consensus disorder prediction 303 354 - -
Lal1g0810 446 Gene3D - 110 164 - -
Lal1g0810 446 ProSiteProfiles IQ motif profile. 111 138 IPR000048 GO:0005515
Lal1g0810 446 PANTHER CALMODULIN-BINDING PROTEIN 1 444 - -
Lal1g0810 446 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 105 155 IPR027417 -
Lal1g0810 446 MobiDBLite consensus disorder prediction 380 446 - -
Lal1g0810 446 PANTHER IQ-DOMAIN 5-RELATED 1 444 - -
Lal1g0810 446 ProSiteProfiles IQ motif profile. 134 161 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0810 Lal-Chr1 5554104 5559812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0810 1 413 IQD Protein Family AT5G62070 45.602 4.59e-57 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0810 - - gmx:100785181 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0810 1 5554104 5559812 Lal1g0810 1 5554104 5559812 ECH
Lal2g0903 2 6002308 6013151 Lal1g0810 1 5554104 5559812 LSH
Lal1g0810 1 5554104 5559812 Lal24g0036 24 241532 245748 PCT
Lal24g0036 24 241532 245748 Lal1g0810 1 5554104 5559812 PCT