Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0803 ATGGCTGTTGCCAAGAGCAACAGCAGCAGCGAACCGTCTACTTCGTACAAGTGTTATAAAGTAGCAGGCTTGACTGGAACCATATTAGACACAAATCATACCTCTAATTTGAAAGATAGATACATTCTTGGGGAGCAGTTAGGTTTGGGACAGTTCGGTGTCATCCGAGCTTGCTCTGACAAGCTGACAGGAGAGGTTTTGGCTTGCAAATCAATAGCGAAAGATAGGTTGGTTACTGCGAATGATCTGAGGAGTGTCAAACATGAGATTGAGATAATGGCTACACTATCTGGGCACCCGAATGTTGTGGACCTCAAGGCAGTTTATGAGGAGGAAGATTATGTCCACTTGGTGATGGAGCTTTGTGCTGGAGGGGAGCTCTTTTACCGATTAGAGAAGCATGGACGGTTTTCTGAATCCGAAGCCAGGGTTCTCTTTAGGCACCTAATGCAGGTTGTTTTGTATTGTCATGAAAATGGCGTTGTTCATAGAGATTTGAAGCCGGAGAACATTCTCTTAGCAACAAAAGCCTCCTCATCTCCAATTAAATTGGCTGATTTTGGTCTTGCAACCTACATCAAGCCTGGACAAAGTTTGCATGGATTAGTTGGAAGTCCATTCTATATTGCTCCGGAGGTACTGGCAGGTGCATATAACCAAGCCGCTGATGTGTGGAGTGCCGGTGTTATTCTTTACATTCTAATGAGCGGGATGGCTCCATTTTGGGGGAAGACCAAGTCGCGGATATTTGAAGCTGTTAAGGCTGCTGACCTGAGGTTCCCACCGGATCCTTGGGATCACATTTCCGTATCAGCTAAGGACTTGATCAGGGGAATGCTCTGTACAGAAGCTTCTCAAAGGCTCACTGCCGAGGAGGTTTTAGATCATTGCTGGATGCAAAGCAATCAAAGCAATCCGAAAGAACTAAGTCAACATAGTATTCAAAGTTGTGAAGAATGGGATGTCGGCGGCAGCTCATTCTCTGCCTCTTTTATGTCCCGGAACCAGGACATCAGCTTTGGCGCTGGATCGCCTGCTTGTGATGCTCAATCACCTACATTCACATGCAGATCATCGTTTTTTTCTTTTGTGGAACCAGTGACACCTTGTTTAGTCTCGGGTGGCTTTTCATTTCAAAGTGCAAGCGATTCCACTGGTTTAGAATTTTCTTCTCCTGTCCCCTCAATGCTTAGCTTTTCATTTCTCAGCCCCAGTCCTGTTGTTGAGCAAAAGAGTTTTAAATCAAAATGCTCAACCAACACTTCAGATGCAAATTCCGCCGCTGGAGAAGCTAGCTTGGGAAAGTTGCTTTTACTACCTGATTCTACCCTTTGCTCTGGAAAAGATGTTAAAGAAACGGATCACAAGCCCGTAGAAACTAAATTGGCAGGTGGAACGAACGGATATAATAGGGTATTGGGAATCCACAGCAAGAGAAACCGAACAATTGGACTTGGTGAGCACGAGCAACTTGACCTTGTGGTGACTGAATCAGTGATCCGTTGGTCATCGTGTACGCAACTCTCTACATCACTGAGATCGTCTCTTGTCTGCTGA 1557 0.4534 MAVAKSNSSSEPSTSYKCYKVAGLTGTILDTNHTSNLKDRYILGEQLGLGQFGVIRACSDKLTGEVLACKSIAKDRLVTANDLRSVKHEIEIMATLSGHPNVVDLKAVYEEEDYVHLVMELCAGGELFYRLEKHGRFSESEARVLFRHLMQVVLYCHENGVVHRDLKPENILLATKASSSPIKLADFGLATYIKPGQSLHGLVGSPFYIAPEVLAGAYNQAADVWSAGVILYILMSGMAPFWGKTKSRIFEAVKAADLRFPPDPWDHISVSAKDLIRGMLCTEASQRLTAEEVLDHCWMQSNQSNPKELSQHSIQSCEEWDVGGSSFSASFMSRNQDISFGAGSPACDAQSPTFTCRSSFFSFVEPVTPCLVSGGFSFQSASDSTGLEFSSPVPSMLSFSFLSPSPVVEQKSFKSKCSTNTSDANSAAGEASLGKLLLLPDSTLCSGKDVKETDHKPVETKLAGGTNGYNRVLGIHSKRNRTIGLGEHEQLDLVVTESVIRWSSCTQLSTSLRSSLVC 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0803 518 ProSitePatterns Protein kinases ATP-binding region signature. 47 74 IPR017441 GO:0005524
Lal1g0803 518 CDD STKc_CAMK 40 298 - -
Lal1g0803 518 Gene3D Phosphorylase Kinase; domain 1 42 126 - -
Lal1g0803 518 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Lal1g0803 518 SUPERFAMILY Protein kinase-like (PK-like) 38 376 IPR011009 -
Lal1g0803 518 PANTHER SERINE/THREONINE-PROTEIN KINASE 5 511 - -
Lal1g0803 518 ProSiteProfiles Protein kinase domain profile. 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0803 518 Gene3D Transferase(Phosphotransferase) domain 1 127 333 - -
Lal1g0803 518 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 34-LIKE 5 511 - -
Lal1g0803 518 SMART serkin_6 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0803 518 Pfam Protein kinase domain 43 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0803 Lal-Chr1 5472539 5476443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0803 28 306 EF-hand Containing Proteins AT1G74740 50.538 2.46e-96 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lal1g0803 Pkinase 8.1e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0803 - - lang:109338501 911.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0803 1 5472539 5476443 Lal1g0803 1 5472539 5476443 ECH
Lal1g0803 1 5472539 5476443 Lal9g0785 9 5595845 5599450 LSH