Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0801 ATGGGTAAAGGAGGAATGTCAATTGATGATCATGGAGAAGGGAAAGATGGTGAAAAACAGAACATGGCTGCTTGGCTTGTTGCTATTAACACTCTCAAGATTCAACCTTTTAATCTTCCTTCTCTTGGACCCCATGATGTCAGAGTTAGAGTGAAGGCTGTTGGTATATGTGGGAGTGATGTTCACTATCTCAAGACACTGAGATGTGCAGACTTTATAGTTAAAGAGCCAATGGTTATTGGCCATGAGTGTGCTGGGATCATAGAAGAAGTTGGCAGTCAAGTAAAGAGTTTGGAGCCTGGTGACCGTGTGGCAATTGAGCCCGGGATCAGTTGTTGGCGTTGTGATCCCTGCAAAAAGGGTCGGTATAATCTATGCCCTGATATGAAGTTTTTTGCTACTCCACCAGTTCATGGTTCTCTTGCTAATCAGATAGTGCATCCAGCAGATCTTTGTTTTAAACTACCAGAGAATGTGAGCTTGGAGGAAGGGGCAATGTGTGAACCCCTAAGTGTTGGTGTTCATGCTTGTAGGCGAGCAAATATTGGACCGGAGACAAATGTACTGATCATGGGTGCAGGACCCATAGGACTAGTTACGCTGCTTGCAGCTCGCGCTTTTGGAGCACCTAGGATCGTCATTGTGGATGTAGATGACCATCGTTTATCTGTTGCTAAGAATCTTGGTGCAGATGATATTGTTAAAGTTTCAACAAACATTGAGGATGTTGCTGAAGAAGTTATACAGATACATAAGGCTATGGGAGCTGGTATTGATGTTACTCTTGATTGTGCTGGTTTTAACAAAACCATGTCAACAGCACTGAGTGCTACTCAGGCAGGTGGCAAAGTTTGCCTAGTGGGAATGGGCCATTCTATAATGACCGTCCCACTCACCCCCGCTGCTGCAAGGGAAGTTGATGTGATTGGCATTTTCCGCTATAAGAACACATGGCCTCTTTGCCTCGAGTTTCTGAGGAGTGGCAAAATCGATGTAAAACCCCTTATAACTCACAGGTTTGGGTTCTCTCAGAAGGAAGTGGAAGAAGCCTTTGAAACAAGTGCTCGTGGTGGTAATGCCATTAAAGTCATGTTCAATCTTTAG 1104 0.4438 MGKGGMSIDDHGEGKDGEKQNMAAWLVAINTLKIQPFNLPSLGPHDVRVRVKAVGICGSDVHYLKTLRCADFIVKEPMVIGHECAGIIEEVGSQVKSLEPGDRVAIEPGISCWRCDPCKKGRYNLCPDMKFFATPPVHGSLANQIVHPADLCFKLPENVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTLLAARAFGAPRIVIVDVDDHRLSVAKNLGADDIVKVSTNIEDVAEEVIQIHKAMGAGIDVTLDCAGFNKTMSTALSATQAGGKVCLVGMGHSIMTVPLTPAAAREVDVIGIFRYKNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFNL 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0801 367 Gene3D - 31 354 - -
Lal1g0801 367 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 158 331 IPR036291 -
Lal1g0801 367 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 81 95 IPR002328 GO:0008270|GO:0016491
Lal1g0801 367 Gene3D - 172 312 - -
Lal1g0801 367 PANTHER SORBITOL DEHYDROGENASE 15 367 - -
Lal1g0801 367 SUPERFAMILY GroES-like 22 193 IPR011032 -
Lal1g0801 367 Pfam Zinc-binding dehydrogenase 195 325 IPR013149 -
Lal1g0801 367 PANTHER L-IDONATE 5-DEHYDROGENASE 15 367 - -
Lal1g0801 367 CDD sorbitol_DH 23 366 IPR045306 GO:0016616
Lal1g0801 367 Pfam Alcohol dehydrogenase GroES-like domain 44 155 IPR013154 -
Lal1g0801 367 SMART PKS_ER_names_mod 27 365 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0801 Lal-Chr1 5460447 5464178 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0801 34 300 Monolignol Biosynthesis Gene Families AT4G37980 27.698 7.66e-20 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0801 K00008 - gmx:100820630 680.633