Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0797 ATGCCATCACGACAACTCCTCCAATCGCCGCCGCAACCCCACAACCACCACCTTCTCACTCCTATCCTCGCCGCCACACTCTGCTTCTTCTCCCTCCTCTTCCTCTTCATCTTCCTTTACCTCCGCACCAAAAAACCCACCACTCCACCACCCAACTCCAAACCCCCACACCGCTACTCCTACTCCCTCCTCCGCCGCGCCACCAACTCCTTCTCCACCCGCTTAGGCCACGGCGGCTTCGGAACCGTCTACTCCGGCAACATCCAAATCGGAAAACCCATCGCCGTCAAGCTCATGGACTCTTCTTCCTACCAAGGCGAGCGCGAGTTCAATAACGAGCTCTTCTTCGCTTCGAATCTCCATTCCCGATACGTTGTAACAGCTTTTGGGTTTTCCTCTGACCCAAAACGACGTCGTTTCCTATTAGTCTACGACCTCATGCAAAAGGGTAACCTTCAAGATGCGCTTTTGCATCGTAAGTGCCCTGAACTCATGGATTGGAAGAAGCGCTTCAATATTGTGTTGGATATAGCAAGAGGTGTTCAATACCTTCATTCTTGTGATCCACCAGTTATTCATGGTGACATAAAACCTAGTAATATTCTGCTTGATGGTGAGTTTTTCGCGAAAATTGGGGATTTCGGGCTCGCTCGGTTGAAATCGGAGCCTAATTTTGAGGTTTTTCATGGTGATGGTGTTGGTGAGGAGAAAAAGAAGGGGGAAGAAGAAGAATTGTCATGTGAGGGTGGAATTGGGGTTAATGATTGTGGTGGATCAGTGATTGAGGAAACTGAGAGTGTGAATACTGGTTTTTGTGAGGAAGGGGGGTTGGGTTTGGAGCAATCTCCTGATGGTTTTGTTAGGGTTCCTATATCGGAGACGTCGCCGGAGACTATGGCTTCACCGGAGACGGTTTTGGACAAGGTTAGCATTAAGAGTGAGAAGAATGATGTTAAGAAGAATGGTAAATGGATGAAGAGTAATTCAATGAGGGATTGGAAAGTGAAGGAACATGTGATGGAGTGGATTGGAAAGGAGGTGAACAAGGAAAAGCCGAAGAGTGAATTTTTTGGAGAAGCAGAATTGGGAAAGGCAGAGAAGAAGAAGAGGAATGGCCAATTGGAATGGTGGGAATCGATGGAGGAGGAAACAATTGACGGGGTTTTGAAGAAGAAGAGAAGGTCAGTAAGGGAATGGTGGAAAGAGGAGCATAGTGAAGAGCTTGCAAGGAAGAAAAAGAAGAAGAAGAAACAACAGATAAGGAATGGTGTTAATATTGATGATTGGTGGGTAAGTGATGATGGTTTGAATGGAGATAAAAAGAGGAGCAAGAGAAGAAGTAGAAACAACCGTGGTGGCGCAGATTGGGGGTTAGATGGACTGAGTGGCGATCTATGGAAAGCTCGCATGAATAGCTATGACTCTGCTGCTAGTGGAGAAATTCCGAAGAGTGGTGGTGTGAGTAGTACTCCTAGTATGAGGGGAACTGTTTGTTATGTTGCTCCTGAGTATGGATATGGTGGAGATGTATCGGAGAAGTGTGATGTATATAGCTTTGGGGTCTTGTTGCTTGTTGTCATTTCTGGTAGGCGCCCACTTCAGGTGAATGGTTCACCAATGTCCGAGTTTCAGCGAGCAAATTTGTTGTCTTGGGCACGGCATTGTGCTAGGAAGGGCAAGCTCATTGAGCTGGTTGATCAATCTATTCAGTCATTGGATAGAGAGCAGGCACTTCTCTGCATCAAAGTGGTCCTGCTTTGTTTGCTTAAATCACCTGATCGTCGCCCTTCAATGAAGGAAGTTGTGGGAATGCTTAGTGGGGAGTTGGAACCACCCCAAGTGCCGGTCGAGTACTCACCTTCGACCCCTTCTCGCTTCCCATTCAAGTCTCGGAAAAAAGGCCGCACATTTTCATGA 1917 0.4726 MPSRQLLQSPPQPHNHHLLTPILAATLCFFSLLFLFIFLYLRTKKPTTPPPNSKPPHRYSYSLLRRATNSFSTRLGHGGFGTVYSGNIQIGKPIAVKLMDSSSYQGEREFNNELFFASNLHSRYVVTAFGFSSDPKRRRFLLVYDLMQKGNLQDALLHRKCPELMDWKKRFNIVLDIARGVQYLHSCDPPVIHGDIKPSNILLDGEFFAKIGDFGLARLKSEPNFEVFHGDGVGEEKKKGEEEELSCEGGIGVNDCGGSVIEETESVNTGFCEEGGLGLEQSPDGFVRVPISETSPETMASPETVLDKVSIKSEKNDVKKNGKWMKSNSMRDWKVKEHVMEWIGKEVNKEKPKSEFFGEAELGKAEKKKRNGQLEWWESMEEETIDGVLKKKRRSVREWWKEEHSEELARKKKKKKKQQIRNGVNIDDWWVSDDGLNGDKKRSKRRSRNNRGGADWGLDGLSGDLWKARMNSYDSAASGEIPKSGGVSSTPSMRGTVCYVAPEYGYGGDVSEKCDVYSFGVLLLVVISGRRPLQVNGSPMSEFQRANLLSWARHCARKGKLIELVDQSIQSLDREQALLCIKVVLLCLLKSPDRRPSMKEVVGMLSGELEPPQVPVEYSPSTPSRFPFKSRKKGRTFS 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0797 638 SUPERFAMILY Protein kinase-like (PK-like) 47 624 IPR011009 -
Lal1g0797 638 ProSiteProfiles Protein kinase domain profile. 69 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0797 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Lal1g0797 638 ProSitePatterns Protein kinases ATP-binding region signature. 75 97 IPR017441 GO:0005524
Lal1g0797 638 Gene3D Phosphorylase Kinase; domain 1 43 146 - -
Lal1g0797 638 Pfam Protein kinase domain 73 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0797 638 MobiDBLite consensus disorder prediction 610 638 - -
Lal1g0797 638 SMART serkin_6 69 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0797 638 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 11 635 - -
Lal1g0797 638 Coils Coil 401 421 - -
Lal1g0797 638 Gene3D Transferase(Phosphotransferase) domain 1 466 613 - -
Lal1g0797 638 Gene3D Transferase(Phosphotransferase) domain 1 147 239 - -
Lal1g0797 638 PANTHER OS07G0586332 PROTEIN 11 635 IPR044576 -
Lal1g0797 638 Pfam Protein tyrosine and serine/threonine kinase 490 604 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0797 Lal-Chr1 5426271 5428187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0797 493 611 Receptor kinase-like Gene Family AT3G19300 37.500 7.67e-12 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Lal1g0797 Pkinase 2.1e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0797 - - lja:Lj2g3v0473820.1 789.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0797 1 5426271 5428187 Lal1g0797 1 5426271 5428187 ECH