Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0796 ATGGCAAAGTTTCCAATGGCAAAGAAGGGTTACCCTTGCATTCTAACAACCTGTCTTATTTTCTGTATGTTTTTCTCTTCAAATGCTCAACTTGTTAAGAAAACTTACCTCATTCAAATGGACAAGTCAGCAATGCCAAAAACCTTTTCCAACCACCTTGATTGGTATTCATCAAAAGTGAACTTAGTACTAGAACCTGATATGAACAATGAAGAGAGAATAATCTATACTTACCATAATGCTTTTCATGGAGTTGCAGCCAAGTTGAGCAAAGAAGAAGCTAAGAAGTTAGAGGCAGAAGAAGGTGTTGTTAACATTTTTCCTGATACAAAGTATCAGCTACACACTACTAGAAGTCCAACATTCCTTGGGCTTGAACCAGCACATAGCACTTATAACATTTGGTCAGAAAAGCTAGCTGATTATGATGTTATAGTTGGAGTGTTAGACACTGGAATTTGGCCAGAGAGTGAAAGCTTCAATGATACTGGTATGAGACCAGTACCTTCTCATTGGAAAGGTGCTTGTGAGATTGGAAGAGGGTTCAGTAAAGATCACTGCAATAAAAAGATTGTTGGGGCTAGAGTGTTCTATCATGGATATGAAGCATCAGTAGGTAAAATCAATGAACAAAAAGAGTATAAATCACCAAGAGATCAAGATGGTCATGGCACTCATACTGCAGCTACAGTTGCTGGCTCACCAGTTCATGGGGCTAACCTTCTTGGCTATGCTTCTGGCACAGCCAGAGGAATGGCACCAGGAGCAAGAATTGCAGCTTACAAGGTCTGCTGGATTGGTGGATGCTTCAGCTCAGATATTTTGTCGGCTATTGATCAAGCAGTAGCTGATGGAGTGAACGTTCTATCGATATCGTTGGGAGGTGGAATCGCGTCTTATTACCGCGATAGTTTAGCGGTTGCTGCATTTGGAGCCATGGAGAAGGGTGTTTTTGTTTCATGTTCTGCTGGAAATGCTGGGCCTGACCCTGCGAGCCTCGCGAATGTGTCACCCTGGATCACCACAGTTGGAGCCAGCACAATGGATAGGGATTTTCCTGCTAATGTGAAGCTTGGAAATGGCGAAAATATGACCGGCGTCTCACTTTATAAAGGAAGCAGTATTCTGTCCATTAGTAAACAATACCCTTTGGTATACTTGGGCAGCAATTCGAGTAGTCTTGATGCAAGATCATTGTGCTTGGAAGGGACGTTGGATCCTCAAGTGGTTTCAGGAAAGATTGTAATTTGTGACAGAGGCCTTAGTCCAAGAGTGCAAAAGGGACATCTGGTGAAAAGTGCAGGAGGAGTGGGAATGATTCTCACAAACACTGCAGTTAATGGTGAAGAGCTGGTTGCAGATTGTCACCTCCTTCCAGCAGTTACAATTGGAGAGAAAGAAGGTAAAGAGCTCAAAAATTATGTCTTAACAAGTAAAAAAGCTACAGCAACTCTAGCTTTTCTAGGTACTAGGTTGGGAATTAGGCCATCTCCTGTAGTAGCAGCATTTTCATCAAGAGGGCCTAATTTTCTGACCCTTGAAATTCTGAAGCCTGATTTAGTGGCCCCTGGGGTGAACATTCTTGCGGCGTGGAGTGAGCTCGTTGGTCCATCGGCTTTGGTAACAGATCAAAGAAGGGTGAGGTTCAATATACTCTCTGGGACCTCAATGTCATGCCCACATGTGAGTGGCATAGCAGCATTGCTCAAGGCTAGGCACCCTGAATGGACTCCAGCTGCTATAAAATCTGCATTGATGACAACAGCTTATGTTCAAGACAACACCATGAACCCTCTAAGAGATGCCTCAAGTGATGAACCTTCAAGTCCTTATGATCATGGTGCTGGACACATTAACCCTGTTAATGCTCTTGACCCAGGTTTAGTCTACGAAATCGAGCCACAGGAGTACTTTGAATTCCTATGCACACAGCATCTAACTCAAAATCAGCTTAGAGGTTTTGCCCAATATTCAAACAGATCTTGTACACACTCTCTTGCTAGTCCTGGAGACTTGAACTATCCAGCAATATCATTAGTTTTTCGGGAGAAAACATCGATCTCAGTTCTAACTGTTCACCGAACTGTCACCAATGTTGGTCCTCCCATTTCTAAATACCATGTTATTGTCTCACCATTCAAAGGTGTTTCTGTCAAAGTTGAGCCAGAAAATTTGAGTTTTACCAGAGAACAGAAGAAGCTATCTTACAATGTTACCTTCACGACGAGATCGCGGCAAACAACACCTGAATTTGGTAGTTTGGTATGGAAGGATGGTATGCACAGAGTGAAAAGTCCAATTGTGATAACATGGCTGTCACCAATATGA 2328 0.4274 MAKFPMAKKGYPCILTTCLIFCMFFSSNAQLVKKTYLIQMDKSAMPKTFSNHLDWYSSKVNLVLEPDMNNEERIIYTYHNAFHGVAAKLSKEEAKKLEAEEGVVNIFPDTKYQLHTTRSPTFLGLEPAHSTYNIWSEKLADYDVIVGVLDTGIWPESESFNDTGMRPVPSHWKGACEIGRGFSKDHCNKKIVGARVFYHGYEASVGKINEQKEYKSPRDQDGHGTHTAATVAGSPVHGANLLGYASGTARGMAPGARIAAYKVCWIGGCFSSDILSAIDQAVADGVNVLSISLGGGIASYYRDSLAVAAFGAMEKGVFVSCSAGNAGPDPASLANVSPWITTVGASTMDRDFPANVKLGNGENMTGVSLYKGSSILSISKQYPLVYLGSNSSSLDARSLCLEGTLDPQVVSGKIVICDRGLSPRVQKGHLVKSAGGVGMILTNTAVNGEELVADCHLLPAVTIGEKEGKELKNYVLTSKKATATLAFLGTRLGIRPSPVVAAFSSRGPNFLTLEILKPDLVAPGVNILAAWSELVGPSALVTDQRRVRFNILSGTSMSCPHVSGIAALLKARHPEWTPAAIKSALMTTAYVQDNTMNPLRDASSDEPSSPYDHGAGHINPVNALDPGLVYEIEPQEYFEFLCTQHLTQNQLRGFAQYSNRSCTHSLASPGDLNYPAISLVFREKTSISVLTVHRTVTNVGPPISKYHVIVSPFKGVSVKVEPENLSFTREQKKLSYNVTFTTRSRQTTPEFGSLVWKDGMHRVKSPIVITWLSPI 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0796 775 Gene3D - 641 772 - -
Lal1g0796 775 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
Lal1g0796 775 PRINTS Subtilisin serine protease family (S8) signature 219 232 IPR015500 -
Lal1g0796 775 PRINTS Subtilisin serine protease family (S8) signature 553 569 IPR015500 -
Lal1g0796 775 Pfam Subtilase family 143 596 IPR000209 GO:0006508|GO:0008236
Lal1g0796 775 ProSiteProfiles Serine proteases, subtilase domain profile. 111 624 - -
Lal1g0796 775 Pfam Peptidase inhibitor I9 35 115 IPR010259 -
Lal1g0796 775 SUPERFAMILY Subtilisin-like 114 628 IPR036852 GO:0004252|GO:0006508
Lal1g0796 775 Pfam PA domain 381 471 IPR003137 -
Lal1g0796 775 CDD PA_subtilisin_like 355 485 - -
Lal1g0796 775 Pfam Fibronectin type-III domain 671 769 IPR041469 -
Lal1g0796 775 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 23 770 IPR045051 -
Lal1g0796 775 Gene3D Peptidase S8/S53 domain 143 637 IPR036852 GO:0004252|GO:0006508
Lal1g0796 775 ProSitePatterns Serine proteases, subtilase family, serine active site. 554 564 IPR023828 -
Lal1g0796 775 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 115 IPR037045 -
Lal1g0796 775 CDD Peptidases_S8_3 112 590 IPR034197 -
Lal1g0796 775 Gene3D - 349 493 - -
Lal1g0796 775 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 23 770 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0796 Lal-Chr1 5420440 5422767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0796 3 775 Subtilisin-like Serine Gene Family AT5G51750 68.380 0.0 1108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0796 - - gmx:100794709 1254.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0796 1 5420440 5422767 Lal1g0796 1 5420440 5422767 ECH
Lal1g0796 1 5420440 5422767 Lal13g0021 13 134498 136846 PCT
Lal1g0796 1 5420440 5422767 Lal24g0027 24 188255 190597 PCT
Lal13g0021 13 134498 136846 Lal1g0796 1 5420440 5422767 PCT
Lal24g0027 24 188255 190597 Lal1g0796 1 5420440 5422767 PCT