Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0785 ATGGCTGGTTCTCTTGGCATGTCAAAAATGCTTGGAAATCCCATCAACTTGAGTGGTGCAACAAGGGCAGTTCCATCACCCTCTAACCATTCTTCTTTCAAGACTATGGCTTTTTTCTCCAACTTCACCAAGAAGAAGGTATCACCACCTTCAAAGCAGAAATCTTCTGCTGTTGTTTCCTCTGCTGATGATGAACTTGCCAAGTGGTATGGTCCTGATAGGAGGGTCTTCTTGCCTGATGGTCTCTTGGACCGATCTGAGATCCCGGCATACTTGACCGGAGAAGTAGCAGGAGACTATGGTTATGACCCACTTGCTCTTGGAAAGAAGCCAGAGGAATTCGCCAGATACCAGGCGAACGAGTTGATTCACGGAAGATGGGCAATGCTTGGTGCTGCCGGAGTCATCATTCCCGAGGCCTTCAACAAATATGGAGCTAACTGTGGTCCTGAGGCTGTTTGGTTCAAGACAGGAGCTCTGCTTCTCGACGGGAACACGTTGAACTACTTCGGCAAACCCATCCCCATCAATCTTGTTGTTGCTGTCATTGCTGAGGTTCTTCTTTTGGGTAGTGCAGAGTACTACAGATTCAATAATGCCCTGGATTTTGAAGACAAGATTCATCCAGGTGGTCCATTTGACCCATTGGGGCTAGCAAAGGATCCAGACCAAGCTGCAATACTAAAGGTGAAGGAAATTAAGAATGGTAGACTTGCAATGTTTGCCATGCTTGGTTTTTTCCTCCAAGCTTATATCACTGGTGAAGGTCCTGTTGAGAACCTTTCAAAGCATCTCAGTGACCCCTTTGGAAACAACTTGCTCACTGTCATTGCTGGATCTGCTGAGAGGGTTCCAACTCTTTGA 864 0.4676 MAGSLGMSKMLGNPINLSGATRAVPSPSNHSSFKTMAFFSNFTKKKVSPPSKQKSSAVVSSADDELAKWYGPDRRVFLPDGLLDRSEIPAYLTGEVAGDYGYDPLALGKKPEEFARYQANELIHGRWAMLGAAGVIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGKPIPINLVVAVIAEVLLLGSAEYYRFNNALDFEDKIHPGGPFDPLGLAKDPDQAAILKVKEIKNGRLAMFAMLGFFLQAYITGEGPVENLSKHLSDPFGNNLLTVIAGSAERVPTL 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0785 287 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 2 287 - -
Lal1g0785 287 SUPERFAMILY Chlorophyll a-b binding protein 69 278 - -
Lal1g0785 287 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 2 287 IPR001344 GO:0009765|GO:0016020
Lal1g0785 287 Gene3D Chlorophyll a/b binding protein domain 76 287 - -
Lal1g0785 287 Pfam Chlorophyll A-B binding protein 89 250 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0785 Lal-Chr1 5325590 5328466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0785 4 287 Chloroplast and Mitochondria Gene Families AT4G10340 75.439 8.15e-147 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0785 K08916 - twl:119991788 452.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0785 1 5325590 5328466 Lal1g0785 1 5325590 5328466 ECH
Lal2g0843 2 5474790 5477786 Lal1g0785 1 5325590 5328466 LSH