Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0771 ATGGAAGAAGTGGAGGTTGTGTCTGATTTACATTCACATTTAGAACCAAGCTTAACTTCTAATATGGACCAACCTTCCTACAAACCGAGCAGCAAAAAGGAAAGTGTTACATTCTTTGGCTTGTTTTCTGCAGCTGATAGATTTGACTATGTCTTAATGTTCCTTGGAAGTGTTGGGGCATGTCTCCATGGTGCTGCTCTTCCTGTTTTCTTTACTTTGTTTGGTCGAATGATTGATTCTTTAGGACATCTTTCTAAGCAGCCTAACAAATTGTCCTCAAGCATATCAGAGCATGCTTTGTACTTGGTCTATCTTGGACTCACCGTTTTGGTATCAGCTTGGATGGGTGTTGCATTCTGGATGCAAACCGGAGAGAGGCAAACAGCTCGATTGCGCTTGAAGTATTTGCAGTCAGTACTAAAGAAGGATGTTAATTTCTTTGACAATGAAGCCAGAGATGCTAATATCATGTTCCACATTTCTAGTGATGCAGTATTGGTACAAGATGCAATTGGTGACAAGACAGGTCATGCTATGCGATACCTTTCTCAATTCATTGTTGGATTTGCAGTTGGATTTACATCAGTATGGCAGCTTACACTACTCACCTTGGCTGTTGTTCCATTGATAGCTATAGCAGGAGGAGCTTATACTATAATTATGTCTACTTTATCAGAAAAGGGTGAAAAGGCTTATGCCGAAGCCGGGAAGGTTGCAGACGAGGTAATTTCTCAAGTGCGTACTGTTTACTCATTCGTAGGAGAAGGGAAAGCAGTTTCTGAATACTCCAAGTCACTTGATAATGCTCTAAAGCTAGGCAAGAGGAGTGGTTTTGCTAAAGGAGTTGGAGTAGGCTTTACATATTGCCTTTTATTTTGTGCTTGGGCGTTGCTTCTTTGGTACGCGAGCATACTTGTGAGGCATCATAAGACTAATGGAGGGAAAGCATTCACAACAATTATCAATGTCATCTTTAGTGGATTTGCTCTTGGTCAGGCTGCTCCAAACCTTGGTTCCATTGCTAAAGGGCGTGCAGCTGCAGCGAATATCATGAACATGATTGCATCCGTTTCGAACACTTCTAAAGGGTTAGACGATGGCACTGTTTTGCCACAAGTAGCAGGGAAAATTGATTTTTTTGAGGTCTGCTTTGCTTACCCTTCAAGATCCAACATGGTCTTTGAAAACTTGAGCTTCTCAGTGAGTGCTGGGAAGACTATAGCATTTGTTGGTCCCAGTGGTTCTGGAAAGAGCACAATCATTTCCATGATTCAAAGGTTCTATGGCCCAACTTCAGGTAAGATCCTATTGGATGGACATGACTTAAAGGATCTTCAGTTGAAATGGTTAAGAGAACAGATGGGTTTGGTTAGTCAAGAGCCAGCACTATTTGCCACAACAATAGCTGCAAACATTTTATTTGGAAAAGAAGATGCAGACATGAATCAAATCATAAAAGCTGCCAAAGTTGCAAATGCTCATTCCTTCATTGATGGATTACCTGATGGTTATCAAACTCAGGTTGGAGAGGGTGGTACCCAACTTTCAGGAGGGCAAAAGCAAAGAATTGCTATAGCAAGAGCAGTGCTCAGAAATCCAAAAATACTGCTTTTGGATGAGGCAACAAGTGCTCTTGATGCTGAATCAGAACTCATTGTACAGAAGGCATTGGAAAATATAATGTCAAACCGGACAACAATAGTTGTTGCGCACCGATTATCCACCATACGCAATGTAGACAGTATTGTAGTCTTGAAGAATGGACAAGTTGTTGAAAGTGGAACTCATTTAGAACTGATGTCAAAAAATGGAGAGTATGCAAGTCTGGTGAGTCTTCAGGCATCACAAATCCTAACAAGCTCCAGTTCAATATCTCGCTCTGGAAGCTCGAAACATTCTAGTTTTAGAGAACTTTCAGATAATCAGAACTATGAGGAGGATTTGAAGTCAATTTCAATAAGAGAGCTACAGCCAAGTGATCAAGGCTTGTCATCAAATACAGCTTCCATTCCATCAATTTTGGATTTACTAAAACTGAATGCTCCTGAGTGGCCGTACGCGATACTTGGGTCGGTAGGTGCAGTTTTGGCTGGCATGGAAGCTCCTCTCTTTGCCTTTGGAATCACACATATTTTGACTGCATTTTACTCTCCTAATGGTTCTAAGATTAAAGAAGAAGTTGATAGAATGGCTCTTATATTTGTTGGAGTGGCTGCTATTACTATACCTATTTATCTATTGCTACACTACTTTTATACATTGATGGGAGAACGCCTCACTGCCCGTGTGCGTTTATTAATGTTCTCAGCTATTCTTCAAAATGAAGTTGCATGGTTTGATTTGGATGAGAACAGCACTGGCTCACTAACAGCAATGCTAGCTGCAGATGCAACATTAGTAAGAAGTGCACTAGCTGATAGACTATCAACAATAGTGCAAAATGTAGCTCTTACTGTAACTGCATTTGCTATCGCCTTCACATTGAGTTGGAAACTAACATCAGTGGTTGTAGCCTGCCTTCCCCTTCTCATAGGAGCTTCTATCACAGAGCAACTATTTCTGAAGGGATTTGGAGGAGATTACAGCCATTCTTACTCTAGAGCAACTTCTTTGGCAGGTGAAGCTATTGCCAACATACGTACCGTTGCTGCTTTTGGCGCAGAAGACCGAATCTCACTCCAATTTGCATCCGAGTTGAACAAGCCTAACAAGCAATCATTTCTAAGAGGCCACATATCAGGTTTTGGATATGGCATAACACAGCTGTTTGCTTTCTGCTCCTATGCACTTGGCCTTTGGTATGCATCAATTTTAATAAAGCAAAAAGAGTCAAATTTTGGAGACATCATGAAATCCTTCATGATCTTAATCATCACTGCTCTCGCGATAGCAGAAACACTAGCTCTTACCCCAGAGATCGTAAGAGGGTCACAGGCACTGGGGTCAGTTTTCAGTATTCTCCGAAGGAAAACAGCCATTAATCCCAATGACCCTAACTCTAAGATGGTAACTGATGTCAAAGGAGAGATAGAGTTCAAAAATGTATCTTTCAAGTATCCAATGAGACCTGATATCACCATATTCCAAAACTTAAACCTCAAAGTCTCAGCAGGAAAGAGTCTTGCAGTAGTAGGACAAAGTGGTTCCGGGAAGAGTACTGTGATTTCTCTTGTAATGAGGTTCTACGACCCGACTTCTGGATCAGTTATGATCGATGAATGTGATATCAAAAGCCTAAACTTAAGATCCTTAAGGACGCGAATAGGACTAGTTCAGCAAGAACCTGCATTATTCTCTACCACAGTATATGAAAACATAAAGTATGGAAAAGAGGAGGCATCAGAAATAGAGGTAATGAAAGCAGCCAAAGCAGCAAATGCTCATGAGTTCATTAGTAGAATGGGTGAAGGGTACAGAACTGAAGTTGGTGGGAGAGGAGTGCAGTTATCTGGTGGACAAAAACAAAGGGTGGCAATAGCTAGAGCAATTCTGAAAGATCCATCAATTCTTCTATTGGATGAAGCAACAAGTGCACTTGACACTGTATCAGAGAGGCTAGTACAGGAGGCTCTTGATAAGCTTATGGAAGGAAGAACTACAATCTTGGTTGCTCACAGACTCTCCACTGTCTGCAATGCCGACAGTATCGCGGTGCTGCAACAAGGGAAGGTTGCTGAAATTGGCAGCCATGAGAGGCTGATTGCTAAACCAGGAAGCATTTATAAGCAATTGGTTAGTCTGCAGCAAGAAAATGGTTGTGATTGTTGA 3768 0.414 MEEVEVVSDLHSHLEPSLTSNMDQPSYKPSSKKESVTFFGLFSAADRFDYVLMFLGSVGACLHGAALPVFFTLFGRMIDSLGHLSKQPNKLSSSISEHALYLVYLGLTVLVSAWMGVAFWMQTGERQTARLRLKYLQSVLKKDVNFFDNEARDANIMFHISSDAVLVQDAIGDKTGHAMRYLSQFIVGFAVGFTSVWQLTLLTLAVVPLIAIAGGAYTIIMSTLSEKGEKAYAEAGKVADEVISQVRTVYSFVGEGKAVSEYSKSLDNALKLGKRSGFAKGVGVGFTYCLLFCAWALLLWYASILVRHHKTNGGKAFTTIINVIFSGFALGQAAPNLGSIAKGRAAAANIMNMIASVSNTSKGLDDGTVLPQVAGKIDFFEVCFAYPSRSNMVFENLSFSVSAGKTIAFVGPSGSGKSTIISMIQRFYGPTSGKILLDGHDLKDLQLKWLREQMGLVSQEPALFATTIAANILFGKEDADMNQIIKAAKVANAHSFIDGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQKALENIMSNRTTIVVAHRLSTIRNVDSIVVLKNGQVVESGTHLELMSKNGEYASLVSLQASQILTSSSSISRSGSSKHSSFRELSDNQNYEEDLKSISIRELQPSDQGLSSNTASIPSILDLLKLNAPEWPYAILGSVGAVLAGMEAPLFAFGITHILTAFYSPNGSKIKEEVDRMALIFVGVAAITIPIYLLLHYFYTLMGERLTARVRLLMFSAILQNEVAWFDLDENSTGSLTAMLAADATLVRSALADRLSTIVQNVALTVTAFAIAFTLSWKLTSVVVACLPLLIGASITEQLFLKGFGGDYSHSYSRATSLAGEAIANIRTVAAFGAEDRISLQFASELNKPNKQSFLRGHISGFGYGITQLFAFCSYALGLWYASILIKQKESNFGDIMKSFMILIITALAIAETLALTPEIVRGSQALGSVFSILRRKTAINPNDPNSKMVTDVKGEIEFKNVSFKYPMRPDITIFQNLNLKVSAGKSLAVVGQSGSGKSTVISLVMRFYDPTSGSVMIDECDIKSLNLRSLRTRIGLVQQEPALFSTTVYENIKYGKEEASEIEVMKAAKAANAHEFISRMGEGYRTEVGGRGVQLSGGQKQRVAIARAILKDPSILLLDEATSALDTVSERLVQEALDKLMEGRTTILVAHRLSTVCNADSIAVLQQGKVAEIGSHERLIAKPGSIYKQLVSLQQENGCDC 1255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0771 1255 Gene3D - 1000 1253 IPR027417 -
Lal1g0771 1255 PANTHER ABC TRANSPORTER B FAMILY MEMBER 13-RELATED 459 565 - -
Lal1g0771 1255 PANTHER ABC TRANSPORTER B FAMILY MEMBER 13-RELATED 541 1248 - -
Lal1g0771 1255 PANTHER ABC TRANSPORTER B FAMILY MEMBER 13-RELATED 37 478 - -
Lal1g0771 1255 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 54 342 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal1g0771 1255 Pfam ABC transporter transmembrane region 689 961 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal1g0771 1255 Pfam ABC transporter transmembrane region 54 326 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal1g0771 1255 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 459 565 IPR039421 -
Lal1g0771 1255 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 37 478 IPR039421 -
Lal1g0771 1255 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 541 1248 IPR039421 -
Lal1g0771 1255 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 367 613 IPR027417 -
Lal1g0771 1255 ProSitePatterns ABC transporters family signature. 515 529 IPR017871 GO:0005524
Lal1g0771 1255 Pfam ABC transporter 1029 1177 IPR003439 GO:0005524
Lal1g0771 1255 Pfam ABC transporter 395 543 IPR003439 GO:0005524
Lal1g0771 1255 Gene3D ABC transporter type 1, transmembrane domain 40 979 IPR036640 GO:0005524|GO:0016021
Lal1g0771 1255 Gene3D - 367 620 IPR027417 -
Lal1g0771 1255 ProSitePatterns ABC transporters family signature. 1149 1163 IPR017871 GO:0005524
Lal1g0771 1255 CDD ABC_MTABC3_MDL1_MDL2 1010 1248 - -
Lal1g0771 1255 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 999 1248 IPR027417 -
Lal1g0771 1255 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1010 1246 IPR003439 GO:0005524
Lal1g0771 1255 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 688 975 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal1g0771 1255 SMART AAA_5 403 589 IPR003593 -
Lal1g0771 1255 SMART AAA_5 1037 1239 IPR003593 -
Lal1g0771 1255 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 377 612 IPR003439 GO:0005524
Lal1g0771 1255 CDD ABC_6TM_Pgp_ABCB1_D2_like 677 993 - -
Lal1g0771 1255 CDD ABC_6TM_Pgp_ABCB1_D1_like 53 350 - -
Lal1g0771 1255 MobiDBLite consensus disorder prediction 13 29 - -
Lal1g0771 1255 CDD ABC_MTABC3_MDL1_MDL2 377 613 - -
Lal1g0771 1255 SUPERFAMILY ABC transporter transmembrane region 676 989 IPR036640 GO:0005524|GO:0016021
Lal1g0771 1255 MobiDBLite consensus disorder prediction 1 29 - -
Lal1g0771 1255 SUPERFAMILY ABC transporter transmembrane region 41 350 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0771 Lal-Chr1 5204542 5210967 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0771 16 1249 Calmodulin-binding Proteins AT2G36910 49.166 0.0 1216