Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0759 ATGGGAGATGCAGAGAGTTGCAGTAGTAGAGTTTTAAATTCTGGGTGGAATCATGTTAACCATATTATTAAGGTTGAAGCTTACAACGAAGTTCTTAGTAGACTTAGGGAATTGAATGTACCTGAGGTTGTTCTTCCTGGTTTTGAAGATGAACTTTGGATGCACTTTAATCGCCTTTCTACTAGATATGTAAGGTATGCACTTGACATGAAGGTGGATAGGGCCAAAGATATTGTTATGCATAAAAGGTTACTGCATATGGCAGGAGCTTCTCCTTTTGCTATTGGACCTGCAGTTGAAGTCCGTGTAGTGCAGGTCCATTCTGCTTCTGGTGTGCATTGTAGCAACTCCCTTCACTCAATTTCACAAAGAGAAATCGGTTCTCAAGATTCTGATATTCCTGGAATGAGGCATGGGCAATGCATGAAATCACAATTTCAACAAATGATAAGCCAAAACTTTTCAGACAGTCTTAGAAATCTATTGGAGGGTGAACTTGGCGCAACGTTAACTTCCCTACTGTCTGAGACCGGGCTTGACATTCAAGAAGCACATGCTTTTTCCACATTGGATGGATATTCATTGGATGTTTTTGTTGTTAGTGGTTGGGCACTTGAGGAGACCGAGAAGCTAAAACATGTTCTCACAAGGAAAATTCATAAACTCGAGCAGCATTGGTTGAAAGAGAGGAGCAGTCCTCCTATGAAGAAACTAGAGCAAACTGAGATCAACTTTAAGCATGTAAATTTGTCCATTAGTGGAAATAATGCTCGGGAAATTGATGCAAGCTGTTTGAGATATGTCAAGAAAATTGCATCTGGGTCTTTCAGTGATGTGTATAAAGGTACCTACTGCAATCAAGATGTAGCTATCAAAGTCCTTAAGAATGGAAATCTGAATGAAAATACACAGACGGAGTTTTCTCGAGAAGTGTATATCCTGAGCAAAATTCAGCATAAGAATGTTATTGAGTTAATTGGTGCCTGTACTAAACCCTCAAACCTTTACATTGTCACAGAATATATGTCTGGTGGAAGCATGTATGACTTTCTGCATATACAGAAGGCTGTCCTTACTCTTTCATCTTTGCTCAAAGTAGCAATTGATATTTCTGAAGGACTATATTGTTTGCATCAAAATGGTATTATACATCGAGACCTTAAAGCTGCGAATCTTCTAATGGATGAGAAAGGGGTAGTTAAGATTGCTGATTTTGGCGTAGCTAGATTGCTAGATCCGACTGGTATCATGACTGCAGAAACTGGAACTTATCGGTGGATGGCTCCAGAGGTCATTGAACATAAGCCATATAGTCACAAAGCCGATATTTTTAGCTTTGGGATTATCCTTTGGGAGCTCCTCACACGAAAGCTTCCTTATGAGCATTTGTCCCCATTGCAAGCAGCAGTTGGAGTGGTCCATAAGGGTTTGAGGCCTGAAATTCCAAGAGATACTCATCCAAAACTAGTGGAATTGCTTCACCAATGCTGGCAGCAAGATCCATCTTTGAGACCAGATTTCTCAGAAATTCTTAAATTTCTGCAGCATTTTAGAAACATGGTTGAAGGGAAGAGAAAGGTGAAGGCAAAGATAATGCATGAGAAAGAATAG 1611 0.3991 MGDAESCSSRVLNSGWNHVNHIIKVEAYNEVLSRLRELNVPEVVLPGFEDELWMHFNRLSTRYVRYALDMKVDRAKDIVMHKRLLHMAGASPFAIGPAVEVRVVQVHSASGVHCSNSLHSISQREIGSQDSDIPGMRHGQCMKSQFQQMISQNFSDSLRNLLEGELGATLTSLLSETGLDIQEAHAFSTLDGYSLDVFVVSGWALEETEKLKHVLTRKIHKLEQHWLKERSSPPMKKLEQTEINFKHVNLSISGNNAREIDASCLRYVKKIASGSFSDVYKGTYCNQDVAIKVLKNGNLNENTQTEFSREVYILSKIQHKNVIELIGACTKPSNLYIVTEYMSGGSMYDFLHIQKAVLTLSSLLKVAIDISEGLYCLHQNGIIHRDLKAANLLMDEKGVVKIADFGVARLLDPTGIMTAETGTYRWMAPEVIEHKPYSHKADIFSFGIILWELLTRKLPYEHLSPLQAAVGVVHKGLRPEIPRDTHPKLVELLHQCWQQDPSLRPDFSEILKFLQHFRNMVEGKRKVKAKIMHEKE 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0759 536 Pfam Protein tyrosine and serine/threonine kinase 266 514 IPR001245 GO:0004672|GO:0006468
Lal1g0759 536 CDD STKc_MAP3K-like 271 514 - -
Lal1g0759 536 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 9 516 - -
Lal1g0759 536 ProSitePatterns Serine/Threonine protein kinases active-site signature. 382 394 IPR008271 GO:0004672|GO:0006468
Lal1g0759 536 SUPERFAMILY Protein kinase-like (PK-like) 245 514 IPR011009 -
Lal1g0759 536 SMART serkin_6 265 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0759 536 ProSiteProfiles Protein kinase domain profile. 265 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0759 536 Coils Coil 205 225 - -
Lal1g0759 536 Gene3D Phosphorylase Kinase; domain 1 258 343 - -
Lal1g0759 536 Gene3D Transferase(Phosphotransferase) domain 1 344 536 - -
Lal1g0759 536 PRINTS Tyrosine kinase catalytic domain signature 339 352 IPR001245 GO:0004672|GO:0006468
Lal1g0759 536 PRINTS Tyrosine kinase catalytic domain signature 376 394 IPR001245 GO:0004672|GO:0006468
Lal1g0759 536 PRINTS Tyrosine kinase catalytic domain signature 422 432 IPR001245 GO:0004672|GO:0006468
Lal1g0759 536 PRINTS Tyrosine kinase catalytic domain signature 441 463 IPR001245 GO:0004672|GO:0006468
Lal1g0759 536 PRINTS Tyrosine kinase catalytic domain signature 485 507 IPR001245 GO:0004672|GO:0006468
Lal1g0759 536 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 9 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0759 Lal-Chr1 5124130 5132520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0759 5 517 MAP Kinase Kinase Kinase AT4G35780 49.168 1.35e-174 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lal1g0759 PK_Tyr_Ser-Thr 1.1e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0759 - - aprc:113864606 645.966