Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0754 ATGGCGGATCAGGGCTCCAATGAAGGCTCCAGTTCTGGCAATATTTCATCTGAATCTTCGGATTCAACTCTTCAGCTCAATATCAAGACTCTTGATTCCCACATCTACAGTTTTCAAGTGGACAGAAATATGTCTGTTTCATCATTCAAAGAGAAAATTGCCAATGAAACAGGTGTCCCAAAGAGCCGGCAACGGCTGATATTTAGAGGAAAAGTATTAAAGGATGAGCACCTTCTTCCTGAGTATCATCTCGAAAATGGACATACATTGCATTTAGTTGAAAGGCAACCGAATCAGTCACAGGTTTCCGGTATGAGTTCTGCTGAGCCAACTGTTACAAATGTTAACCAAGGAAATGATGCTGGGTCGGGGGTTCCTCATAATCGTGTTGGGACAATTTCGCACAGTGTTGTTCTCGGGACTATTAACATGGAGGAACAAGGTGATGGCATGGTTCCTGACCTTAATGGGGTTATTGGGGCGGTCCTGAATTCTATTGGCATTGCTGGCCAGAACAGAAGTAGTGTTTCTAATGCTACACAAACTTCTGCTTCATCAGGGAGTGACACTGAAGGTATACATGCTGGAAATTGGAACCTAGCAGGAAATCAAGCACACTCTGGACAGACATTTCATGGTCAGGCATTCTCGTCTCTTCCTCAAGTTGTTCAGATTCCTGTCCCTGCTGGGGCCATACCTATTCCTTCGCTGAATGCACCAATCCCTCATTCATTGAACACAGTGTCTGAGTTTATAAACAGCATGGAACACACACTATCACAAAATGGTCATCGGCTGAATCTGTCTTCAACTAACCCGAGAGATGAACAAGTAGAATTGCCAACCAATGCACAAGGGTTGCCGACGCTTGAAGCATTAAGCATCGTTGTCCATCGCACAGAACAATTGCTTAGTGGTCGCGCTGTTGCTGCTTTATCTCATATTGCAGGACGCTTGGACCGGGATGGAACTTCTTCTGATTTAAGTATAAGGGGTCAAATTCAGTCAGAATCAATGCAAACAGGGCTTGCTATGCAACATTTAGGCGCACTTCTTCTCGAGCTTGGCCGAACAATGTTGACACTGCGCATGGGGCAATCTTATGCAGAATCTGCTGTTAATGCTGGACCAGCAGTTTATATTTCCCCATCAGGGCCGAATCCTATAATGGTACAGCCCTTTCCACTTCAGACAAGCTCCCTCTTTAGTGGTCATGTTCCTTCTTCAACTCCTCCAACATTTGGTGCCGTTGGTAATGGAAGTGTTCCTAGGAACGTAAGCATCCATATACACGCTGGTACCTCTCCTGCATCAATTATTTCATCAATTGGTTCTAGGCCAAATAATGGGGAAGAGATAGGAGGTGAACTCCATAGTGAGCCCGGCTCTGGTGTTGGAGTTGCTAGCAGCACACAAACTGGGTTTGGTCTTTCTACTTCACAACCACCTTCTCATTCATCACTTGTAGCTGAAATTAATTCTGATATTCGTAACATTCTTTGTGATATGCAAAGAGATAACACAGATCTGTTTCCTTCTGATCCAACTCCATCGTCATCATCAGTTTTAGCTGAAATGAATTCTCGCCTTAATAACATTGTTGGTAATATGCAAGGAGATAGCACAGATCTGTCAGGTCAAATAGAATCAAATAGTAGACACTTGCCTGCCAGTTCTGAATCACGGCCTGCATCGGGAAACGAACAGCTAGGTACCATGGAGGTGAATGGCTTTGGGGTATCCTCGATTGGTTGTACTTCTGAAAGTGGAGTACATAAGCCCCAAACAGAGGCATTCAAAACCTGTTGTAGTGACAAGAGAGATGTTTCAGTTGACAAATTTGTTTCTGATCAAGTTTCTTCAAGGGGAGAAACAATAACAAAATCAGAAAAAGTACAAGGTGCTTCATCTGGAAGTGAAGAACGTGATGCAACTGAACCTGCCAAAACTGCTCCATTAGGATTGGGTATGAGTGGTCTGGAGCGTAAAAAGCGAACTCGCCCTCAACCTCCTGCAAGCAAGGGTGCTGATGTTGAACCATCTGGTTCTTCTGCCAATCAAAGTCAGCATGCTAGAACAGATGGTCAACAAATATTGCGAACTCTTGTCAGCCATGGATCTGCTCTGAATTTGAGAAATCCTAACGGGCCATCCCAGCAGCCCTTGCCCTCTGGTGACAACCAGATTGATATGGCTGGTTTAATGTCTCAGGTTTTGCCTAGCCCTGCTATGAATGGTTTGTTGTCAGGGGTTTCACAGCAAACTAGAGTTGACTCACCTGATGGCTTGAGGAATATGTTGCAACAGTTCACACAGAATCCTCAGATGATGAACACAGTCAATCAAATCGCTGAACAGGTTGGCAGCGAGGATATTGGAAATATGTTTGCTGGAATGGAAAGAGGGCAAGGCGGTGGTATTGACTTGTCAAGTATGTTTCAACAGATGTTGCCGATTGTATCTCGAGTCCTTGGTGGGGGAAGTCCTCCCCCACTCTTCTCTGCAGCAGAACCACAGCCCCAGGCACCCCACAGAGATGAAAATTCTTATAACCGAAGTTTACAGTTGCAATGCCATAATAGTGCCATCTCTTATGATCATTTCCTTATCCTCCGCATATTCCAGCTTGACCTTCAACCAGTGGTAGAGAGGATTGAGCGCCTGAGTCCACCTACGGATGTTTTCCGCGCTGTCGCTGAAAATGCTATCCATGTATCTGGCAATGGAAGTGGTGCTAATGATCTTCTGGACGAGTTATGCAGCAATGAGAGTCTTGTTGGTGAATATGTGAAGATGTTGCGAAATGATGTAAAGCAACGATGCAAGGGACATTCTGAGTTGGACAAGTCCTAA 2853 0.4476 MADQGSNEGSSSGNISSESSDSTLQLNIKTLDSHIYSFQVDRNMSVSSFKEKIANETGVPKSRQRLIFRGKVLKDEHLLPEYHLENGHTLHLVERQPNQSQVSGMSSAEPTVTNVNQGNDAGSGVPHNRVGTISHSVVLGTINMEEQGDGMVPDLNGVIGAVLNSIGIAGQNRSSVSNATQTSASSGSDTEGIHAGNWNLAGNQAHSGQTFHGQAFSSLPQVVQIPVPAGAIPIPSLNAPIPHSLNTVSEFINSMEHTLSQNGHRLNLSSTNPRDEQVELPTNAQGLPTLEALSIVVHRTEQLLSGRAVAALSHIAGRLDRDGTSSDLSIRGQIQSESMQTGLAMQHLGALLLELGRTMLTLRMGQSYAESAVNAGPAVYISPSGPNPIMVQPFPLQTSSLFSGHVPSSTPPTFGAVGNGSVPRNVSIHIHAGTSPASIISSIGSRPNNGEEIGGELHSEPGSGVGVASSTQTGFGLSTSQPPSHSSLVAEINSDIRNILCDMQRDNTDLFPSDPTPSSSSVLAEMNSRLNNIVGNMQGDSTDLSGQIESNSRHLPASSESRPASGNEQLGTMEVNGFGVSSIGCTSESGVHKPQTEAFKTCCSDKRDVSVDKFVSDQVSSRGETITKSEKVQGASSGSEERDATEPAKTAPLGLGMSGLERKKRTRPQPPASKGADVEPSGSSANQSQHARTDGQQILRTLVSHGSALNLRNPNGPSQQPLPSGDNQIDMAGLMSQVLPSPAMNGLLSGVSQQTRVDSPDGLRNMLQQFTQNPQMMNTVNQIAEQVGSEDIGNMFAGMERGQGGGIDLSSMFQQMLPIVSRVLGGGSPPPLFSAAEPQPQAPHRDENSYNRSLQLQCHNSAISYDHFLILRIFQLDLQPVVERIERLSPPTDVFRAVAENAIHVSGNGSGANDLLDELCSNESLVGEYVKMLRNDVKQRCKGHSELDKS 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0754 950 MobiDBLite consensus disorder prediction 464 486 - -
Lal1g0754 950 MobiDBLite consensus disorder prediction 444 486 - -
Lal1g0754 950 MobiDBLite consensus disorder prediction 172 193 - -
Lal1g0754 950 Pfam Ubiquitin family 26 96 IPR000626 GO:0005515
Lal1g0754 950 SMART ubq_7 24 95 IPR000626 GO:0005515
Lal1g0754 950 CDD Ubl_ubiquitin_like 26 93 - -
Lal1g0754 950 PANTHER OS07G0498800 PROTEIN 6 946 - -
Lal1g0754 950 ProSiteProfiles Ubiquitin domain profile. 24 99 IPR000626 GO:0005515
Lal1g0754 950 SUPERFAMILY Ubiquitin-like 19 98 IPR029071 -
Lal1g0754 950 MobiDBLite consensus disorder prediction 708 729 - -
Lal1g0754 950 MobiDBLite consensus disorder prediction 535 572 - -
Lal1g0754 950 MobiDBLite consensus disorder prediction 172 201 - -
Lal1g0754 950 MobiDBLite consensus disorder prediction 679 694 - -
Lal1g0754 950 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 6 946 - -
Lal1g0754 950 MobiDBLite consensus disorder prediction 1 21 - -
Lal1g0754 950 MobiDBLite consensus disorder prediction 708 726 - -
Lal1g0754 950 MobiDBLite consensus disorder prediction 617 694 - -
Lal1g0754 950 MobiDBLite consensus disorder prediction 617 640 - -
Lal1g0754 950 Gene3D - 13 108 - -
Lal1g0754 950 PRINTS Ubiquitin signature 34 54 IPR019956 -
Lal1g0754 950 PRINTS Ubiquitin signature 55 75 IPR019956 -
Lal1g0754 950 PRINTS Ubiquitin signature 76 97 IPR019956 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0754 Lal-Chr1 5064812 5076214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0754 24 95 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 37.500 9.83e-11 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0754 - - lang:109325669 1534.24