Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0752 ATGACTTTACTCTCTAAATTAAAAACTCACTCACCATCACCTTCACCTTCACCAACAGAGAATCAAAAAATGGACCTAAGAAGTGGTTTCAACAGTTCCAACTCAACCTACTACAGCAAACGAAAACCACTTCCACTCCCTCAAAACCCTTTCTTAGACGTAACCACTTTCATCTCTTCCCATTCCCACCGCGGCAACATCGCTTTCATCGACTCCGCCACTCGCCGCCACTTCACCTTCCACCACCTCTGGCTCGCCGTCGACTCCGTCTCCTCTTCTCTCTCCTCCATCGGAATCCGAAAAGGCGACGTCGTTCTCCTCCTCTCTCCTAACTCCATCTACTTCCCCGTCGTTTGTCTCTCCGTCATGTCCCTCGGCGCTATCATCACCACCACCAACCCTCTCAACACCGCCAATGAAATCGCCAAACAGATCACTGATTCTAAATCTGTTCTCGCTTTCACTACCCCTGAACTCGTAACTAAAATAACCGCTTCTTCACCGAACCTTCCAATTATTCTCATCGAAGAAAATGAAGATGTTCAACATAGTGGAGTAATTGACACGCTTCAAAACTTGATGAAGAAAGAACCTTCGGTTAACCGAGTTAAGGAGCGAGTTAACCAGGACGATACCGCCACTCTTTTATACTCTTCCGGCACAACTGGACCAAGCAAAGGTGTTGTTTCTTCACACCGGAATTTAATCTCTATGGTGCAAATTGTTCACAGAAGGTTCAGCAGTGAAGATTTACAAACTTTCATATGCACTGTGCCGATGTTTCATATCTACGGTTTAATAGCATTTGCAACTGGAATTCTATCTTTGGGTTCAACCATTGTAGTTTTATCGAAATTCGAGATGCATGATATGCTGTTATCAATTGAGAAGTTTCGCGCTACGTTTCTTCCTCTGGTGCCGCCAATTTTGGTTGCGATGATCAACAACGCGGAAGCGATTAAGGCGAAGTATGATCTGAGTTCTTTACATTCGGTGTTATCGGGTGGAGCACCGCTGAGTAAGGAAGTGACAGAAGGGTTTGTGGAGAATTATCCTAACGTGGCCATTTTGCAAGGGTATGGGTTAACGGAATCTACTGGTGTTGGTGCTTCTACGGATTCGTTGGAAGAGAGTAGAAGGTACGGTACGGCGGGGCTTTTGTCGCCGGCTACAGAGGCTAAGATTGTTGACCCTGAATCTGGGGAGGCGCTGCCGGTTAACAGGACCGGTGAGCTTTGGCTCAGGGGCCCCACCATCATGAAAGGAGTATCTTTAACACATCAGTTGTACAGTAATTTTCTTAAGTTTCAGTATGAGGTTCGGGACTGGATTGGTAGTGCTGTTTTTGCAAGCCATATATCTTTCAAAGCTCCTGCTCCAATAGATTCCTCCAACCTTTTTACTTCAAGAAGTATTGGAATATATGTGGGTGATATTTGGAAACTGGTGCAAGATGCTTTCGCATATGCTTTGAGGTTTAACATTAAAGGCATGGTGATGGCAGGTTATTTCAGTAATGCAGAAGCAACTGCATCAACCCTTGATTCACAGGGATGGTTAAGAACAGGGGATGTTTGCTACATTGATAATGATGGTTTTGTATTTATCGTTGATAGGTTGAAGGAGCTGATTAAGTACAAGGGATATCAGGTTCCTCCAGCAGAACTAGAAGCCTTGTTGCTTACCCATCCTGCTATTTCCGATGCTGCTGTTATACCGTACCCAGATAGAGAAGCTGGACAGATTCCATTTGCATATGTGGTGAGGAAGGATGGAAGTAGCTTATCAGAAAATGAAATTATGGATTTTGTTGCAAAACAGGTGGCTCCTTATAAAAGAATTAGAAGAGTGGCGTTTACATCTTCTGTACCCAAAAACCCATCAGGTAAAATTCTTAGGAAGGATCTCATTAAGCTCGCAACATCGAAACTCTGA 1935 0.4429 MTLLSKLKTHSPSPSPSPTENQKMDLRSGFNSSNSTYYSKRKPLPLPQNPFLDVTTFISSHSHRGNIAFIDSATRRHFTFHHLWLAVDSVSSSLSSIGIRKGDVVLLLSPNSIYFPVVCLSVMSLGAIITTTNPLNTANEIAKQITDSKSVLAFTTPELVTKITASSPNLPIILIEENEDVQHSGVIDTLQNLMKKEPSVNRVKERVNQDDTATLLYSSGTTGPSKGVVSSHRNLISMVQIVHRRFSSEDLQTFICTVPMFHIYGLIAFATGILSLGSTIVVLSKFEMHDMLLSIEKFRATFLPLVPPILVAMINNAEAIKAKYDLSSLHSVLSGGAPLSKEVTEGFVENYPNVAILQGYGLTESTGVGASTDSLEESRRYGTAGLLSPATEAKIVDPESGEALPVNRTGELWLRGPTIMKGVSLTHQLYSNFLKFQYEVRDWIGSAVFASHISFKAPAPIDSSNLFTSRSIGIYVGDIWKLVQDAFAYALRFNIKGMVMAGYFSNAEATASTLDSQGWLRTGDVCYIDNDGFVFIVDRLKELIKYKGYQVPPAELEALLLTHPAISDAAVIPYPDREAGQIPFAYVVRKDGSSLSENEIMDFVAKQVAPYKRIRRVAFTSSVPKNPSGKILRKDLIKLATSKL 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0752 644 Gene3D - 495 541 IPR042099 -
Lal1g0752 644 Gene3D - 36 427 IPR042099 -
Lal1g0752 644 ProSitePatterns Putative AMP-binding domain signature. 215 226 IPR020845 -
Lal1g0752 644 MobiDBLite consensus disorder prediction 1 26 - -
Lal1g0752 644 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 19 422 - -
Lal1g0752 644 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 501 643 - -
Lal1g0752 644 Gene3D - 542 643 IPR045851 -
Lal1g0752 644 SUPERFAMILY Acetyl-CoA synthetase-like 62 423 - -
Lal1g0752 644 Pfam AMP-binding enzyme 62 422 IPR000873 -
Lal1g0752 644 Pfam AMP-binding enzyme 498 546 IPR000873 -
Lal1g0752 644 Pfam AMP-binding enzyme C-terminal domain 555 630 IPR025110 -
Lal1g0752 644 PANTHER BNAA06G14440D PROTEIN 19 422 - -
Lal1g0752 644 PANTHER BNAA06G14440D PROTEIN 501 643 - -
Lal1g0752 644 SUPERFAMILY Acetyl-CoA synthetase-like 498 641 - -
Lal1g0752 644 CDD 4CL 46 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0752 Lal-Chr1 5055441 5059278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0752 499 551 Monolignol Biosynthesis Gene Families AT1G20510 83.019 4.39e-25 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0752 K10526 - gmx:100811344 588.956