Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0745 ATGAATTATATTATTATTGCATGTGGTACTAATTGGGAGATGAGTTGCATTTCTTGTCTTGCTTTTCGTCAAAAGAAATTGAATAATAGAATTGAAGAAAAAGATAATCTAGATTTGAAGGACAAAATTGGAGCAGAAAACTCATCTGGGGCTTCAAGTTTCAGCTTTTATGCTCTTTCATTGGCAACAAAGGGTTTCAAGGGTTCAAATTTGATTGGTGAAGGAGGTTTTGGAAAAGTTTACAAGGTCGATCTATGTAGCCGATTTTACGATAAAAATTTGGTTATTGTTACACAGGTTGTTGCTATAAAACAATTAAACCTTGATGGTCAACAAGGTTCTCATGAATTTGTTACTGAGGTTCTTATGTTAAGCCTCTTCCATCATTCAAATCTTGTGAAATTAATTGGCTATTGCAGTGAAGGAAATCAGAGGCTTTTGGTTTATGAATACATGCCCAAGCGTAGCCTTGAACATCATCTTTTTGAACCAGACAATAATAAAGCACTATCTTGGAATGTTCGGATGAAAATAGCTGTTGGAGCTGCACGTGGGCTAGAGTATCTTCAATGCAAAGCATATCCACCAGTTATCTACAGAGACTTGAAATCTGCAAACATATTATTGGACCATGATTTTAACCCAAAACTCTCAGATTTTGGTCTTGCTAAACTTGGTCCAGTTGGAGATAATACACATGTTTCAACCAGAGTCATGGGTACATATGGTTATTGTGCCCCTGAATATGCCATGAGTGGAAAATTGACACTTAAATCTGATATATACAGTTTTGGTGTTGTCTTGTTAGAATTGATCACTGGACATAAGGCTTTAGATTTGACCAGAAAATCTGGCCACCAAAACTTAGTTGCATGGTTTCGGCCATATTTCAATAACAAAAGAAAGTACGCACAATTGATTGACCCTCGTTTAGAAGGAAATTGTCCTTCACGTAGTTTGCACCATGCAATTGCTATTACTGCAATGTGTCTCCAAGAGGATGCAAATCGTCGTCCACTTATTCATGATATTGTTGTTGCACTCGAATACATAGCTTCTAAGAGCATTCATGAACTCAACAAGGGTCAAGAATCAAAACCAGAAACAGATATCAACTAA 1119 0.3646 MNYIIIACGTNWEMSCISCLAFRQKKLNNRIEEKDNLDLKDKIGAENSSGASSFSFYALSLATKGFKGSNLIGEGGFGKVYKVDLCSRFYDKNLVIVTQVVAIKQLNLDGQQGSHEFVTEVLMLSLFHHSNLVKLIGYCSEGNQRLLVYEYMPKRSLEHHLFEPDNNKALSWNVRMKIAVGAARGLEYLQCKAYPPVIYRDLKSANILLDHDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGHKALDLTRKSGHQNLVAWFRPYFNNKRKYAQLIDPRLEGNCPSRSLHHAIAITAMCLQEDANRRPLIHDIVVALEYIASKSIHELNKGQESKPETDIN 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0745 372 Gene3D Transferase(Phosphotransferase) domain 1 152 370 - -
Lal1g0745 372 CDD STKc_IRAK 72 349 - -
Lal1g0745 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Lal1g0745 372 ProSiteProfiles Protein kinase domain profile. 66 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0745 372 ProSitePatterns Protein kinases ATP-binding region signature. 72 104 IPR017441 GO:0005524
Lal1g0745 372 Pfam Protein tyrosine and serine/threonine kinase 70 347 IPR001245 GO:0004672|GO:0006468
Lal1g0745 372 Gene3D Phosphorylase Kinase; domain 1 38 151 - -
Lal1g0745 372 PANTHER OS07G0668900 PROTEIN 38 357 - -
Lal1g0745 372 SUPERFAMILY Protein kinase-like (PK-like) 49 349 IPR011009 -
Lal1g0745 372 PANTHER OS07G0668900 PROTEIN 38 357 - -
Lal1g0745 372 SMART serkin_6 66 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0745 Lal-Chr1 5013197 5016289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0745 14 353 Glycoside Hydrolase AT3G07070 52.446 1.02e-128 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lal1g0745 PK_Tyr_Ser-Thr 1.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0745 - - lang:109352138 544.273