Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0744 ATGAAGGGTGGAAAATCAAAAACTGAGACAAAAAGAGCTGATCCCAAGCTTGCTGTGAATAAGAAGGGTGCTGCTGCTGCGAAACCGGCAAGGAAACCGGCTAAGGGGAAGGCTGCTAAAGACCCTAACAAGCCTAAGAGGCCTGCCAGTGCCTTCTTCGTTTTCATGGAGGAGTTTAGGAAGCAGTTCAACAAAGAAAATCCCGAGAACAAAGCTGTCTCCGCTGTTGGCAAGGCTGCTGGAGCCAAATGGAAGTCCATGTCTGAAGCTGAGAAAGCACCATATGTGGCGAAGGCAGAGAAACGGAAAGTGGAGTATGAGAAGAATATGAGAGCCTATAACAACAAACAGGCTGAAGGCCCTGCTGCTGCAGATGAAGAATCTGAGAAATCAATTTCAGAGGTGAATGACGAGGATGATGGGGATGATGATGGAAGTGATGAGGATGAGGATGATGATGATGATGATGATGAGTAG 477 0.4717 MKGGKSKTETKRADPKLAVNKKGAAAAKPARKPAKGKAAKDPNKPKRPASAFFVFMEEFRKQFNKENPENKAVSAVGKAAGAKWKSMSEAEKAPYVAKAEKRKVEYEKNMRAYNNKQAEGPAAADEESEKSISEVNDEDDGDDDGSDEDEDDDDDDDE 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0744 158 Gene3D High mobility group box domain 28 131 IPR036910 -
Lal1g0744 158 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 1 152 IPR031061 -
Lal1g0744 158 Coils Coil 96 116 - -
Lal1g0744 158 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 45 114 IPR009071 -
Lal1g0744 158 Pfam HMG (high mobility group) box 45 114 IPR009071 -
Lal1g0744 158 SUPERFAMILY HMG-box 33 124 IPR036910 -
Lal1g0744 158 SMART hmgende2 44 115 IPR009071 -
Lal1g0744 158 MobiDBLite consensus disorder prediction 94 112 - -
Lal1g0744 158 MobiDBLite consensus disorder prediction 1 18 - -
Lal1g0744 158 MobiDBLite consensus disorder prediction 78 158 - -
Lal1g0744 158 PANTHER HIGH MOBILITY GROUP B PROTEIN 2-RELATED 1 152 - -
Lal1g0744 158 MobiDBLite consensus disorder prediction 131 158 - -
Lal1g0744 158 CDD HMGB-UBF_HMG-box 45 111 - -
Lal1g0744 158 MobiDBLite consensus disorder prediction 1 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0744 Lal-Chr1 5008311 5010748 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Lal1g0744 HMG_box 8.4e-24 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0744 K25507 - lang:109352139 206.453