Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0742 ATGGAGAAATCAGGAGTATCAGTGTTATCAGCAAAAGAAGCATTTGAAAAGTTAGAGAAAGTGGGAGAAGGAACTTACGGAAAGGTTTACAGAGCTAGAGATAAAGCCACTGGTAAAATTGTCGCTCTTAAGAAAACTCGTCTTCACGAAGACGATGAAGGTGTCCCTCCCACCACTCTTCGTGAAGTCTCCATTCTTCGGATGCTCTCGCGCGATCCACATATCGTTAGGTTGATGGATGTGAAACAAGGTCAGAACAAGGAAGGGAAGACGGTTCTGTATCTGGTTTTTGAATACATGGATACAGATCTGAAGAAATTCATTCGATCTTTCCGTTCCACTGGGCAAAACATTCCTCCTGCAACCGTCAAAAGCTTGATGTTCCAACTATGCAAGGGTGTTGCTTTCTGCCATGGTCATGGAATCTTGCACGGGGACTTGAAGCCTCACAATTTGTTGATGGATCGAACAACTATGATGCTTAAAATTGCTGATCTAGGACTCGCTCGAGCATTCACTGTTCCGATTAAGAAATATACTCATGAGATACTGACCCTTTCGTATAGAGCTCCTGAAGTTCTTTTGGGAGCTACCCACTACTCAATGGCTGTGGATGTCTGGTCTGTTGGCTGCATATTTGGTAAACTATCTTATCGTCCGAACTTATCACGAAGACAACGCTCTTTCCGGTGGAACCCTAAGAGTCTGTCAATTGCTGTTCCTGGTTTGGATGAACTCGGACTCGATTTACTAGCTCAAATGTTGAAATATGAGCTTGCTAGCCGAATTTCTGCAAAGAGAGCAATGGAACATGCTTACTTTGATGACTTGGACAAGACCTATCTTTGA 849 0.4335 MEKSGVSVLSAKEAFEKLEKVGEGTYGKVYRARDKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHIVRLMDVKQGQNKEGKTVLYLVFEYMDTDLKKFIRSFRSTGQNIPPATVKSLMFQLCKGVAFCHGHGILHGDLKPHNLLMDRTTMMLKIADLGLARAFTVPIKKYTHEILTLSYRAPEVLLGATHYSMAVDVWSVGCIFGKLSYRPNLSRRQRSFRWNPKSLSIAVPGLDELGLDLLAQMLKYELASRISAKRAMEHAYFDDLDKTYL 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0742 282 ProSiteProfiles Protein kinase domain profile. 15 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0742 282 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Lal1g0742 282 Gene3D Phosphorylase Kinase; domain 1 10 101 - -
Lal1g0742 282 Pfam Protein kinase domain 15 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0742 282 SMART serkin_6 15 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0742 282 PANTHER CELL DIVISION PROTEIN KINASE 234 280 - -
Lal1g0742 282 PANTHER CELL DIVISION PROTEIN KINASE 9 219 - -
Lal1g0742 282 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Lal1g0742 282 Gene3D Transferase(Phosphotransferase) domain 1 103 281 - -
Lal1g0742 282 PANTHER - 9 219 - -
Lal1g0742 282 PANTHER - 234 280 - -
Lal1g0742 282 SUPERFAMILY Protein kinase-like (PK-like) 12 278 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0742 Lal-Chr1 4990420 5002552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0742 1 282 Core Cell Cycle Gene Families AT1G20930 71.429 5.70e-157 438
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Lal1g0742 Pkinase 4.5e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0742 K07760 - gmx:100799839 469.159