Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0735 ATGGAGAAATCAGGAGTATCAGTGTTATCAGCAAAAGAAGCATTTGAAAAGTTAGAGAAAGTGGGAGAAGGAACTTACGGAAAGGTTTACAGAGCTAGAGATAAAGCCACTGGTAAAATTGTCGCTCTTAAGAAAACTCGTCTTCACGAAGACGATGAAGGTGTCCCTCCCACCACTCTTCGTGAAGTCTCCATTCTTCGGATGCTCTCGCGCGATCCACATATCGTTAGGTTGATGGATGTGAAACAAGGTCAGAACAAGGAAGGAAAGACGGTTCTGTATCTGGTTTTTGAATACATGGATACAGATCTGAAGAAATTCATTCGATCTTTCCGTTCCACTGGGCAAAACATTCCTCCTGCAACCGTCAAAAGCCTGATGTTCCAACTATGCAAGGGTGTTGCTTTCTGCCATGGTCATGGAATCTTGCACAGGGACTTGAAGCCTCACAATTTGTTGATGGATCGAACAACTATGATGCTTAAAATTGCTGATCTAGGACTCGCTCGAGCATTCACTGTTCCGATTAAGAAATACACTCATGAGATACTGACACTTTGGTATAGAGCCCCTGAAGTTCTTTTGGGAGCTACCCACTACTCAATGGCCGTGGATGTCTGGTCCGTTGGCTGCATATTTGCCGAACTTATCACGAAGACAGCGCTCTTTCCGGGTGACTCAGAGCTGCAACAACTCCTTCATATATTCAGACTCTTGGGTACTCCTAATGAAACAGTGTGGCCAGGGGTTAGTAAACTAATGAACTGGCATGAGTACCCACAGTGGAACTCTAAGAGTCTGTCAACTGCTGTTCCTGGTTTGGATGAACTCGGACTCGATTTACTAGCTCAAATGTTGAAATATGAGCCTGCTAGCCGAATTTCTGCGAAGAAAGCAATGGAACATGCTTACTTTGATGACTTGGACAAGACCTATCTTTGA 942 0.4427 MEKSGVSVLSAKEAFEKLEKVGEGTYGKVYRARDKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHIVRLMDVKQGQNKEGKTVLYLVFEYMDTDLKKFIRSFRSTGQNIPPATVKSLMFQLCKGVAFCHGHGILHRDLKPHNLLMDRTTMMLKIADLGLARAFTVPIKKYTHEILTLWYRAPEVLLGATHYSMAVDVWSVGCIFAELITKTALFPGDSELQQLLHIFRLLGTPNETVWPGVSKLMNWHEYPQWNSKSLSTAVPGLDELGLDLLAQMLKYEPASRISAKKAMEHAYFDDLDKTYL 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0735 313 Gene3D Phosphorylase Kinase; domain 1 10 101 - -
Lal1g0735 313 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Lal1g0735 313 SMART serkin_6 15 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0735 313 Pfam Protein kinase domain 15 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0735 313 Gene3D Transferase(Phosphotransferase) domain 1 103 312 - -
Lal1g0735 313 PANTHER CELL DIVISION PROTEIN KINASE 9 311 - -
Lal1g0735 313 SUPERFAMILY Protein kinase-like (PK-like) 12 309 IPR011009 -
Lal1g0735 313 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Lal1g0735 313 PANTHER - 9 311 - -
Lal1g0735 313 ProSiteProfiles Protein kinase domain profile. 15 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0735 Lal-Chr1 4974477 4977592 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0735 1 313 Core Cell Cycle Gene Families AT1G20930 83.810 0.0 547
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Lal1g0735 Pkinase 3.6e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0735 K07760 - gmx:547738 587.03