Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0729 ATGGCAACCATCAACCAACTCATGACCATGTTTCTGTCACTGATCTTCCTCCTACACATAGCTTATGTAGCATCATCTGATCTCCGACCTGGGTTTTACTCAAAAACATGTCCACAAGCTGAATTCATAGTCCGATATGTCATGAAGAATGCCCTCATCATGGAACCTAGAAGTCTAGCCTCTGTTATGCGCTTCCAATTCCATGATTGCTTTGTAAATGGGTGTGATGCATCTATGTTGCTTGATGACACACCAACCATGCTTGGGGAGAAACTGGCTCTCTCAAATATAAATTCGCTTAGATCATTTGAAGTTATTGATGAAGTCAAAGAGGCTCTTGAGAACGAGTGCCCAGGAATTGTTTCTTGTGCTGATATCATCATCATGGCATCTAGAGATGCTGTTGCACTGACAGGAGGACCTAATTGGGATGTGAAGTTAGGTAGATTAGATAGCTTAATTGCTTATCAAGAAGACTCTAATAACATTATGCCTAGTCCAAGAGCCAATGCAAGTGCTCTTATTAACCTCTTCCAAAATTATAACCTTAGTGTTAAAGACCTTGTATCACTCTCAGGATCACACTCTATTGGCAAGGCTAGATGTTTTTCTATCATGTTTAGGTTATATAATCAATCTGGAACTGGAAAACCTGACCCTGCCATTGATCCATATTACAGAAAAGAGCTTAATAAACTATGTCCCATTGATGTTGATCAGAATGTGACCGGGAACCTTGATGCTACACCATTGGTGTTTGATAATCAATATTTTAAGGACTTGGTTGCTGGCAGGGGATTTCTTAACTCTGATCAAACCCTTTTCACTTTCCATCAGACAAGGAAGTTTGTGGAGTTATATAGTAGAAATCAAAGTCAGTTTTTTGAAGCATTTGTTGAAGGGATGTTGAAAATGGGTGACTTGCAATCTGGGAGGCCTGGTGAAGTTAGGAAGAATTGCAGGGTCGTAAATGCTCCTCCGACATCTTCTTCGTACTCTTAG 1002 0.4022 MATINQLMTMFLSLIFLLHIAYVASSDLRPGFYSKTCPQAEFIVRYVMKNALIMEPRSLASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLALSNINSLRSFEVIDEVKEALENECPGIVSCADIIIMASRDAVALTGGPNWDVKLGRLDSLIAYQEDSNNIMPSPRANASALINLFQNYNLSVKDLVSLSGSHSIGKARCFSIMFRLYNQSGTGKPDPAIDPYYRKELNKLCPIDVDQNVTGNLDATPLVFDNQYFKDLVAGRGFLNSDQTLFTFHQTRKFVELYSRNQSQFFEAFVEGMLKMGDLQSGRPGEVRKNCRVVNAPPTSSSYS 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0729 333 Pfam Peroxidase 46 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal1g0729 333 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal1g0729 333 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal1g0729 333 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal1g0729 333 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal1g0729 333 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal1g0729 333 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal1g0729 333 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal1g0729 333 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal1g0729 333 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal1g0729 333 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal1g0729 333 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal1g0729 333 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal1g0729 333 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal1g0729 333 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal1g0729 333 CDD secretory_peroxidase 28 323 IPR033905 GO:0004601|GO:0042744
Lal1g0729 333 PANTHER PEROXIDASE 72-RELATED 13 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal1g0729 333 PANTHER PEROXIDASE 17 13 325 - -
Lal1g0729 333 Gene3D - 31 324 - -
Lal1g0729 333 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Lal1g0729 333 SUPERFAMILY Heme-dependent peroxidases 28 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lal1g0729 333 ProSiteProfiles Plant heme peroxidase family profile. 27 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal1g0729 333 Gene3D Peroxidase, domain 2 165 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0729 Lal-Chr1 4929150 4931872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0729 8 327 Peroxidase AT2G22420 71.118 5.10e-177 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0729 K00430 - gmx:100796737 540.806