Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0719 ATGGACAAGGGACCACCACCTAGCCTCTTTGTTAATGATGGTTCGTTCTTGGAGAGGTTCAAGCAACTTCAACAAGAGCAAGAGAAGGGGAAGAATGCCAAATTAGAGGAGTCTAAGCCAATTAAAGTTGCTTCAGGGTCCTTGGCTTTTAATCCCTCCACCCGTAAGGCTAATGATACACAGAAAACTCCCCAGGCTGGTTCTAGTGGCAAACTTGCTTTCAGTTTAAAACAAAAGTCAAAGCTAGTGCCACCCCCTGTTAATTTAGCTGATGATGATGAAGAAGAAACAAATGCTGGGGATGCTTCAAATGATGCACCACCAAAACGGCAAAAATTGGGTCAGGCGGATATCACTGAGCAATCATTGAGACAACATGATGTTGCACCTTCTTCTCCAAGTGATCCTACAGTGAAGAAAGTTGCTGACAAGCTAGCAAGTTTTGTGGCGAAAAATGGAAGGCAGTTCGAGGATGTTACACGCCAAAAAAATCCCGGAGATACACCTTTCAAATTTTTATTTGATGAAAAATGTGCTGATTACAAATATTATGAACATCGGCTTGCTCAAGAGGAAAAGGCTCTTGCACAGTCCAGGGAACCACAGTCATATGGGACTGTTTTATCTGCAGGGGGTACAAGCATTTCATCTTCCAGACCATCAAATGGTCCTCAGAAATCATCCCAGCAACATTCAACCTACCAAATTCCTGCTTCTGTTTTATATGAACGTGCTGAAGAACCATGGTCTTCTGGATCTTCAGTGCAAGCATCATCAGCAGGAAGTACTAATGAACCCAGTGGATCATCTAATGCTGATTCTTTAGCACTAATGGAGTTCTACATGAAGAGAGCTGCACAGGAAGAGAGGTCGAGACGACCTAAGCATTCAAAAGATGAGATGCCCCCTCCAGCTTCTCTTCAAGCAGCTTCTGGGAAAAAGGGCCATCACATGGGCGATTACATTCCCCTAGAAGAACTAGAGAAGTTCATGGCTAACTGTAATGATGCAGAAGCCCAGAAAGCTGCAAAGGAGGCTGCAGAGAGGGCTAAAATTCAGGCTGATAATGTTGGCCACAAGCTTTTATCAAAAATGGGTTGGAAAGAAGGTGAGGGTCTTGGCAGCTCCAGAAAGGGTATTGCAGATCCTATAATGGCAGGCAGTGTTAAGAAAGATAACTTGGGAGTTGGGGCTGTCCAACCTGGGGAGGTGACTCCTGAAGATGACATCTATGAGCAGTACAAAAAGCGCATGATGCTTGGCTACCGTCACAGACCCAATCCTCTGAACAATCCTCGCAAGGCTTATTACTGA 1314 0.446 MDKGPPPSLFVNDGSFLERFKQLQQEQEKGKNAKLEESKPIKVASGSLAFNPSTRKANDTQKTPQAGSSGKLAFSLKQKSKLVPPPVNLADDDEEETNAGDASNDAPPKRQKLGQADITEQSLRQHDVAPSSPSDPTVKKVADKLASFVAKNGRQFEDVTRQKNPGDTPFKFLFDEKCADYKYYEHRLAQEEKALAQSREPQSYGTVLSAGGTSISSSRPSNGPQKSSQQHSTYQIPASVLYERAEEPWSSGSSVQASSAGSTNEPSGSSNADSLALMEFYMKRAAQEERSRRPKHSKDEMPPPASLQAASGKKGHHMGDYIPLEELEKFMANCNDAEAQKAAKEAAERAKIQADNVGHKLLSKMGWKEGEGLGSSRKGIADPIMAGSVKKDNLGVGAVQPGEVTPEDDIYEQYKKRMMLGYRHRPNPLNNPRKAYY 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0719 437 MobiDBLite consensus disorder prediction 286 300 - -
Lal1g0719 437 Coils Coil 327 347 - -
Lal1g0719 437 MobiDBLite consensus disorder prediction 194 272 - -
Lal1g0719 437 Pfam G-patch domain 355 398 IPR000467 GO:0003676
Lal1g0719 437 SUPERFAMILY Surp module (SWAP domain) 128 192 IPR035967 GO:0003723|GO:0006396
Lal1g0719 437 MobiDBLite consensus disorder prediction 249 272 - -
Lal1g0719 437 SMART surpneu2 139 193 IPR000061 GO:0003723|GO:0006396
Lal1g0719 437 MobiDBLite consensus disorder prediction 286 317 - -
Lal1g0719 437 MobiDBLite consensus disorder prediction 24 38 - -
Lal1g0719 437 SMART G-patch_5 352 399 IPR000467 GO:0003676
Lal1g0719 437 MobiDBLite consensus disorder prediction 47 75 - -
Lal1g0719 437 ProSiteProfiles G-patch domain profile. 354 401 IPR000467 GO:0003676
Lal1g0719 437 MobiDBLite consensus disorder prediction 196 237 - -
Lal1g0719 437 Pfam Surp module 140 190 IPR000061 GO:0003723|GO:0006396
Lal1g0719 437 Gene3D Surp module 91 197 IPR035967 GO:0003723|GO:0006396
Lal1g0719 437 PANTHER ARGININE/SERINE RICH SPLICING FACTOR SF4/14 3 437 IPR040169 -
Lal1g0719 437 MobiDBLite consensus disorder prediction 115 132 - -
Lal1g0719 437 MobiDBLite consensus disorder prediction 24 140 - -
Lal1g0719 437 ProSiteProfiles SURP motif repeat profile. 141 184 IPR000061 GO:0003723|GO:0006396
Lal1g0719 437 PANTHER SURP AND G PATCH DOMAIN-CONTAINING 1 3 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0719 Lal-Chr1 4822064 4829045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0719 283 437 C2H2 Transcription Factor Family AT5G26610 27.273 4.21e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0719 K13096 - gmx:100786213 662.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0719 1 4822064 4829045 Lal1g0719 1 4822064 4829045 ECH