Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0718 ATGGCTCAAAAGATGGAGAAAGAAGAGACGGAGTTTAAGAAGGTTCCAGAAACTATTACCTTAACGTCGTGCGTTAACAACTGCGGCGTTACCGTTAACTCTTCCACCAATAACAGCATGTGTCAGAAATGTTTTAACGCTACCACCGCTTCGATCTCATCACCTTCTAGATTCTCCGATGATAAAGCTTCAGCTACGATCGGATCTGCCACGTCATCACGTTCTCCGAAGAGATCTTGTCCTTCTGATGAAAGCGATTTGAAAACGGATCAACGGAGATCCAGTGAAACTGCGTCGTTTGAGGCTAAACGTGTTGTGAATCGGTGCTCCGGTTGCCGGAAGAGAGTCGGACTCACCGGATTTCGGTGTCGGTGCGGCGACCTTTTTTGCTCCGAGCATAGGTACTCTGATCGTCATGATTGTGGCTACGATTATAAAACCGCTGGAAGGGAAGCCATAGCGAGGGAGAATCCGGTGGTGAAAGCGGCGAAGATCGTCAAAGTTTGA 507 0.4813 MAQKMEKEETEFKKVPETITLTSCVNNCGVTVNSSTNNSMCQKCFNATTASISSPSRFSDDKASATIGSATSSRSPKRSCPSDESDLKTDQRRSSETASFEAKRVVNRCSGCRKRVGLTGFRCRCGDLFCSEHRYSDRHDCGYDYKTAGREAIARENPVVKAAKIVKV 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0718 168 ProSiteProfiles Zinc finger AN1-type profile. 103 149 IPR000058 GO:0008270
Lal1g0718 168 SMART AN1_Zf_4 109 146 IPR000058 GO:0008270
Lal1g0718 168 MobiDBLite consensus disorder prediction 79 97 - -
Lal1g0718 168 SUPERFAMILY AN1-like Zinc finger 93 162 IPR035896 -
Lal1g0718 168 Pfam AN1-like Zinc finger 109 146 IPR000058 GO:0008270
Lal1g0718 168 MobiDBLite consensus disorder prediction 51 97 - -
Lal1g0718 168 Gene3D - 74 164 IPR035896 -
Lal1g0718 168 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 168 - -
Lal1g0718 168 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 5 1 168 - -
Lal1g0718 168 MobiDBLite consensus disorder prediction 51 78 - -
Lal1g0718 168 Gene3D - 3 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0718 Lal-Chr1 4813660 4814166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0718 107 168 C2H2 Transcription Factor Family AT3G52800 66.129 1.55e-27 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0718 - - adu:107463072 235.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0718 1 4813660 4814166 Lal1g0718 1 4813660 4814166 ECH