Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0708 ATGGCTTCTACGCTCCCTCACTCCACTGCAGATGTTAAGGGAGCAAAAGTCCTCATGGTTGGTGCTGGTGGAATTGGCTGTGAGCTTCTCAAGACTCTCGCTCTCTCTGGTTTCTATGACATACACATCATTGACATGGACACCATAGAAGTCAGTAACCTAAACAGACAATTTTTATTTCGACAATCGCATGTTGGGCAATCCAAGGCCAAAGTTGCTAGGGATGCTGTCTTAAAGTTTAGGCCCGACATAAGTATTACACCATACCATGCAAATGTGAAAGACCCTGACTTCAATGTGGACTTCTTTAAGCAATTTAATGTTGTTCTAAATGGACTGGACAATCTAGATGCACGCCGCCATGTGAATCGTTTGTGCTTGGCAGCCAATGTTCCTTTGGTTGAAAGTGGTACTACTGGGTTCCTCGGACAGGTAACTGTACATGTCAAGGGAAAAACGGAGTGCTACGAGTGTCAGCCTAAACCAGCTCCCAAGACATATCCTGTTTGTACTATCACAAGCACTCCATCAAAGTTTGTTCACTGTATTGTGTGGGCAAAAGATCTACTTTTTGCTAAGTTGCTTGGTGACAAGAATCAGGAAAATGATTTAAATGTAAGATCAAGTGATGCTGCCAGTTCATCCAAAAATGTAAAGGATGTATTTGAACGTAGGAAAGATGAGGACATTGAAGAATATGGAAGGAAAATATTTGATCATGTGTTTGGGTATAACATTGAATTAGCTTTGTCTAATGAAGAGACATGGAAAAGTCGTAATAGACCAAAACCTATATACAGCAAGGATGTCTTGTCTGAGGAATTGGCTCCACAGAATGGAAATGTGACCAACAAGCATGCATCAGATGATGGATTATCAGTTTCTGCTATGACATCTTTGGGCATGAAGAACCTACAGGATATCTGGAGTGTTAAAGAAAATTCTAGAATATTTCTGGAAGCACTGAGACTATTTTTCACAAAGAGGGAAAAGGAGATTGGCAATCTGAGCTTTGATAAAGATGATCAGTTAGCTGTTGAATTTGTTACTGCAGCTGCAAACATTCGGGCTGCTTCATTTGGCATCCCCCTGCACAATCTTTTTGAAGCTAAAGGTATTGCTGGTAATATTGTGCATGCCGTTGCAACAACAAACGCTGTTATTGCTGGGTTGATTGTCATCGAAGCAATGAAAGTGCTGCGGAATGACATTCAAAGTTATAGAATGACATATTGTCTGGAACATCCATCAAGAAACATGCTGCTTATGCCTGTGGAGCCATTTGAACCTAACAAGTCCTGTTATATGCCTTTATTGCTTGAAGTAAACACAAACCATTCGAAGTTGAAGGACTTAGTTGAAAAGATTGTCAAGGCAAAGCTTGGGATGGACCTTCCTCTTATCATGAATGCTTCATCTCTTCTTTATGAAGCTGGTGATGTTGAGGATGACATGGTTCCAATTTATGAAGCCAACCTTGAAAAGGTCCTATCCGAGCTTCCTTCTCCAGTAACAGGTGGGACAATGCTTACAGTAGAGGATTATCAGCAGGAGCTCAAGTGCAATATTAACATCAAGCACAGAGAGGAGTTCGACGAAGAGAAAGAACCTGATGGGATGGTTCTCTTAGGATGGACTCAACCTGTGTCAGGAGCAGAAAGTAAAGACAAGTCTATTGGTAATGGCGCAAGCACGTCAGATGCAACAATAGCAGCTGCAGAATCTGAAATAGATGATGAGATAGGCATAGTTTCTCCCTTGAAAAAGAGAAAACTTCCTGATGATTCCGATGTTTCAAAAGCTGTTACCGAAACAAAGAATCACAAGCAATTGCAAGTAATCGACGATGAAGACGATCTTGTTGTGCTTGAGGGGAATCTAGATGGTTTTAAAAAGAGAAGATTGTGA 1908 0.4104 MASTLPHSTADVKGAKVLMVGAGGIGCELLKTLALSGFYDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPDISITPYHANVKDPDFNVDFFKQFNVVLNGLDNLDARRHVNRLCLAANVPLVESGTTGFLGQVTVHVKGKTECYECQPKPAPKTYPVCTITSTPSKFVHCIVWAKDLLFAKLLGDKNQENDLNVRSSDAASSSKNVKDVFERRKDEDIEEYGRKIFDHVFGYNIELALSNEETWKSRNRPKPIYSKDVLSEELAPQNGNVTNKHASDDGLSVSAMTSLGMKNLQDIWSVKENSRIFLEALRLFFTKREKEIGNLSFDKDDQLAVEFVTAAANIRAASFGIPLHNLFEAKGIAGNIVHAVATTNAVIAGLIVIEAMKVLRNDIQSYRMTYCLEHPSRNMLLMPVEPFEPNKSCYMPLLLEVNTNHSKLKDLVEKIVKAKLGMDLPLIMNASSLLYEAGDVEDDMVPIYEANLEKVLSELPSPVTGGTMLTVEDYQQELKCNINIKHREEFDEEKEPDGMVLLGWTQPVSGAESKDKSIGNGASTSDATIAAAESEIDDEIGIVSPLKKRKLPDDSDVSKAVTETKNHKQLQVIDDEDDLVVLEGNLDGFKKRRL 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0708 635 PANTHER SUMO-ACTIVATING ENZYME SUBUNIT 11 553 - -
Lal1g0708 635 Gene3D Ubiquitin activating enzymes (Uba3). Chain: B, domain 2 165 376 IPR023318 -
Lal1g0708 635 Gene3D - 6 110 IPR042449 -
Lal1g0708 635 Gene3D - 437 624 - -
Lal1g0708 635 Pfam Ubiquitin-activating enzyme, SCCH domain 318 371 IPR019572 -
Lal1g0708 635 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 13 482 IPR035985 GO:0008641
Lal1g0708 635 Pfam ThiF family 10 434 IPR000594 -
Lal1g0708 635 CDD Uba2_SUMO 16 435 - -
Lal1g0708 635 PIRSF SUMO_E1B 3 617 IPR030661 GO:0016925|GO:0019948
Lal1g0708 635 Pfam Ubiquitin/SUMO-activating enzyme ubiquitin-like domain 440 531 IPR028077 -
Lal1g0708 635 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 11 553 IPR045886 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0708 Lal-Chr1 4725361 4732468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0708 336 430 EF-hand Containing Proteins AT2G30110 35.000 4.68e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0708 K10685 - gmx:100794304 1088.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0708 1 4725361 4732468 Lal2g0771 2 4947206 4953718 LSH
Lal1g0708 1 4725361 4732468 Lal9g0676 9 4651704 4658101 LSH