Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0693 ATGGAAAGAATGTATTCATCTCTTATTTTTCTTTTGTTTTTCCTTTGTGACATTTCTCTCATTGAGGGTTTTGGCTTTAGTGTAGAACTCATCCATCGTGATTCTCCAAAATCACCATTCTACATTCCCAGTGAAACTCATTTTGAACGAGTAGCTAAAGCTATTCGTCGTTCCATCAACCAAGCTAATCATTTCAACAAACCTTCTTTTTCCACAAAAAATATTGAGTCTGATGTGCTTGCTAATAGAGGTGACTACCTCATGAGTTACTCGATTGGCACACCGCCAGTCAAAATCTTAGGTATTGCTGATACTGGTAGTGACATTATTTGGTTGCAATGCGAGCCTTGTGACCCTTGTTCCCCACAAACCTCTCCAATCTTTGACCCTTCAAAATCCACAACATACAAAAACATTTCTTGCACTTCTGATGCATGTCAATCTGTGAGAGACACCAGTTGCTCTTCAGAAGGAAGTCAACAAAGTTGTCAATATAGGATTGGCTATGGGGATGGTTCAAAATCCCAAGGGGATCTTAGTTTGGATACTCTTTCTTTTAGTTCCACCAAGGGCTCTGCTGTCTCATTTCCAAAAACTGTGATTGGATGTGGAACCAGTAACACTTTAGGTAATCAAGGTCCAGGTTCTGGCATAGTTGGTCTTGGAAATGGACCTGTTTCACTCATAACTCAACTTGGTTCTTCAATACAAGGCAAATTTGCCTATTGTTTGGCGCCATCACTTTCACGGACTACCTCCCCAACCAAACTCAACTTTGGATCTGAAGCTTTGGTTTCTGGTGATGGTACAGTCTCAACTCCATTGTTCCTAGATAAAACCTTTTACTACCTAACCTTAGAAGCGTTCAGTGTTGGAAATAAAAGAGTGGAATTTGGAAGCTCTTCCTCTAGTAGTGGAGGATCTGGTAACATCATAATTGATTCTGGTACAACATTGACTCTTTTGCCCAGTGATGTTTACTCTGAGTTAGAATCAACGGTCGCTTCTGAGATAACATTGAATCGTGTTGAAGCCCCTTCACCATCGTTGAGCCTTTGCTACGAAGCCCCATCAGATGGAAATTTGGACGTTCCAGTGATCACAGCACATTTTACTGGTGCAGATGTCAAGTTGAATGCTCTCAACACCTTTTTTCAAGTTAGTGAAGATACTATATGTTTTACTTTTGTCCCAACTAACCAACCCGTTAGCATATATGGAAATTTGGCACAACAAAACTTTTTGGTTGGCTATGACCTTCAAAAGAAAACTCTCCAATTCAAGCCAACTGATTGCACAAACCAATGA 1308 0.4029 MERMYSSLIFLLFFLCDISLIEGFGFSVELIHRDSPKSPFYIPSETHFERVAKAIRRSINQANHFNKPSFSTKNIESDVLANRGDYLMSYSIGTPPVKILGIADTGSDIIWLQCEPCDPCSPQTSPIFDPSKSTTYKNISCTSDACQSVRDTSCSSEGSQQSCQYRIGYGDGSKSQGDLSLDTLSFSSTKGSAVSFPKTVIGCGTSNTLGNQGPGSGIVGLGNGPVSLITQLGSSIQGKFAYCLAPSLSRTTSPTKLNFGSEALVSGDGTVSTPLFLDKTFYYLTLEAFSVGNKRVEFGSSSSSSGGSGNIIIDSGTTLTLLPSDVYSELESTVASEITLNRVEAPSPSLSLCYEAPSDGNLDVPVITAHFTGADVKLNALNTFFQVSEDTICFTFVPTNQPVSIYGNLAQQNFLVGYDLQKKTLQFKPTDCTNQ 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0693 435 Pfam Xylanase inhibitor C-terminal 282 428 IPR032799 -
Lal1g0693 435 PANTHER ASPARTIC PROTEINASE CDR1-RELATED 1 433 - -
Lal1g0693 435 Gene3D Acid Proteases 60 258 IPR021109 -
Lal1g0693 435 CDD pepsin_A_like_plant 86 432 IPR034161 -
Lal1g0693 435 ProSiteProfiles Peptidase family A1 domain profile. 86 428 IPR033121 -
Lal1g0693 435 PANTHER OS07G0603500 PROTEIN-RELATED 1 433 - -
Lal1g0693 435 SUPERFAMILY Acid proteases 82 432 IPR021109 -
Lal1g0693 435 Pfam Xylanase inhibitor N-terminal 86 261 IPR032861 -
Lal1g0693 435 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 311 322 IPR001969 GO:0004190|GO:0006508
Lal1g0693 435 Gene3D Acid Proteases 259 435 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0693 Lal-Chr1 4576297 4577604 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0693 84 432 Miscellaneous Gene Families AT1G44130 24.194 4.75e-19 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0693 - - gmx:100789696 496.123