Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0673 ATGTCAGAGTATCTTCCAGTAGCAATTGTGGAACAAATTCTTCTTAAACTTTCACCAATCACACTACTCAAGTTAACTTTAGTCTCCAAATCATGGCTACTTTTCATTCAAAGCGATTCCTTTATTTCCTTACACCTTCAACATTCCCCTTCTTCCCTTCTCTTATGCATTTCTACAAACACCTTATCTGCACAGTGGTCCCTTACTAATATCACTCCCTCTCCTTCCCCTACAATCACAACACTTCAACCCCCATTTCCTGCCCCTCTTTCTTGTTTGTTCCGCTTTCTCCAATCCCTAAACGGCCTCGTTTGTCTCATCCAAAAATTGTTCCTTCCTCAACAAGCTATCATCCTATGGAACCCTTCCATTGGGAGATACCTTACACTCCAAATTCCACCAATTGAAGAGATTGAGGCTCTTGGGTTTGGGTTTGATTCCAAGAACAATGATTTCAAACTGATCAAATTGTTTAACCCTGATCATCAAGTGGAGCTGTATTCCCTCAATGAGGGTGCTTGGAGGGCTATTGATTTCCCACATCGACAAGAATTAGGGTTGGTTAGGTTTTCAGACACGCGGTGTTTTCTGAATGGGTATGTGCATTGGATTGCAGAATGTAGTACTCAAGAAGGCCCTAAGGTATTGCTATTGAAGTTCAATGTGGAGAAAGAGAAGTTTAGGAAGATGAAGCTTCCGCGAGAATTGGTTAACTCACCAATTTCAAGACTGGAAGTTACTGTCATTGAAGGTTGTCTCTCCGTGTTACTTTACGATGGCGCGCCACCATTGCGAGGTGCTAATGGTTGGTGTGACATATGGATGATGAGAGCGTATGATGTGGCTGAATCGTGGATTAAGATTGGCAAGGTTCATATGCCAGATGGAGGACATGTCTTTGGAGTGAGTACAAGTTCAAATGTTTTTGTGAATTGGTCAAATTGGTCTGGTACAGAATTCAGCTCCCTGCATTCCATGGATCCCAACACTCAAAAGGTTACAGACATCGGGATTCCAGGTAGAGCAATCACCGCATGCGAGTACACAGGGAGCTTGGTTTTACTTAACAAAACATGA 1077 0.4262 MSEYLPVAIVEQILLKLSPITLLKLTLVSKSWLLFIQSDSFISLHLQHSPSSLLLCISTNTLSAQWSLTNITPSPSPTITTLQPPFPAPLSCLFRFLQSLNGLVCLIQKLFLPQQAIILWNPSIGRYLTLQIPPIEEIEALGFGFDSKNNDFKLIKLFNPDHQVELYSLNEGAWRAIDFPHRQELGLVRFSDTRCFLNGYVHWIAECSTQEGPKVLLLKFNVEKEKFRKMKLPRELVNSPISRLEVTVIEGCLSVLLYDGAPPLRGANGWCDIWMMRAYDVAESWIKIGKVHMPDGGHVFGVSTSSNVFVNWSNWSGTEFSSLHSMDPNTQKVTDIGIPGRAITACEYTGSLVLLNKT 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0673 358 SMART fbox_2 5 45 IPR001810 GO:0005515
Lal1g0673 358 Pfam F-box associated 196 310 IPR006527 -
Lal1g0673 358 PANTHER AND ASSOCIATED INTERACTION DOMAINS-CONTAINING PROTEIN, PUTATIVE ISOFORM 1-RELATED 5 355 - -
Lal1g0673 358 TIGRFAM F_box_assoc_1: F-box protein interaction domain 98 302 IPR017451 -
Lal1g0673 358 SUPERFAMILY F-box domain 3 57 IPR036047 GO:0005515
Lal1g0673 358 Pfam F-box domain 5 41 IPR001810 GO:0005515
Lal1g0673 358 SUPERFAMILY Galactose oxidase, central domain 111 354 IPR011043 -
Lal1g0673 358 PANTHER OS09G0372900 PROTEIN-RELATED 5 355 - -
Lal1g0673 358 ProSiteProfiles F-box domain profile. 1 45 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0673 Lal-Chr1 4392382 4393458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0673 125 275 Carbohydrate Esterase AT1G25141 24.691 8.83e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0673 - - lang:109363373 585.104