Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0661 ATGTCATCATCATTTCCTTCTTCCTTTGATGAATTTATCCTGACCAGTTCCCCTGATGGCCCTATCGTCGCTTATGAAGCTTCCACCGGCGCCACCTATACACACTTCAGCCACTGTAGATCACCGCGTCGTGGCCTCACCATGGTTAACCAAAGTCTGATTGCAGTATCTCATGTATTCTCAGACACTGGTGCTGGTTCAGTCCAAATCTATAACTGGCATATTTCAAATGTCTTTAACAACTTCCCTCTTCCTGAACCTGTTGCACCTCTCATTGCTACTTCTGATGGTGCTTTTCTCTTTCTTGGTGGTCTCTCTGGTACCATTCATTCTCTCTCATTCCCTTCTGGCAATCTCGTCAATTCTTTTTCTCTTCACTCAACACCTATCTCTTCTCTTCATCTCAATCATGATGCCTCGCTTCTCATATCAGGGAGTAATGATGGGGTGATAGTTATGATCCCAAGTTTTAAGCTTGTTGAGGAAGGATCTTATTCATTAGCTGAAGAGGAGGACTCAAGAGATTTTATATTGCACCAGTGGAAGGCACATTCTGATTCAATAACTGCATTGAAATCTGGGGTAGGACTTTGTAGATCTACATTGATCTCTTGTTCACTTGATTGCACATGCAAAATTTGGGATATGTCAAATGGGGTTCTGATACAAACAGTGACATTCCCTTATGCTATTTTTGGGGTTGCTTTGGATTCAAGAGAGTCAAGATTTTATGCTGGTGGTGAAGATGGTTTGGTTTATATGGGTTCAATGAATAGAGAAATGATAAAGAAAGGGTATGAATTGTTTACTTGGTCTAAGTGTCATAATGGGTCAATTGTGTCATTGGTTTTGGTAAATGAGGGTAGGAATTTGGTTTCTGCTGCAGAAGATGGGAGTGTTTGGAAATGGGATGTTATGAATGGAGAAGTCACTATGGTTCTTGGAAATAATAATGACAAGAGAAGCATGATTAGTGATATGATAGTGGCTACAAGAGATAGAAATCATGGAGTAGTTATAAAGGAAAATGATGTTGTTATTGGAGATAGTGAAATCAATGACCTCATTTCTTCTTCTTCTTTTTCTTCTTCTAGGCTTTATGATGAAGAGGTAGTTACAAATCTCATGCAAATAACAGATTTTGGACAAGTGTTGGATGTCCTAGTAGAGGACAAGAAAAAAGCTATTAACATGTTGGAATCTGCAATTGAGATGTATGAGAGGCTATTGAAACTTATCCTTAAAGAAGCTATGAGAGGCATTAGTGGTAGTAATGATGATGAAGATAAAGAAAAACAAGGAGACAAAGAACAAGAGGAAGAAAATGAGAATTAA 1335 0.3873 MSSSFPSSFDEFILTSSPDGPIVAYEASTGATYTHFSHCRSPRRGLTMVNQSLIAVSHVFSDTGAGSVQIYNWHISNVFNNFPLPEPVAPLIATSDGAFLFLGGLSGTIHSLSFPSGNLVNSFSLHSTPISSLHLNHDASLLISGSNDGVIVMIPSFKLVEEGSYSLAEEEDSRDFILHQWKAHSDSITALKSGVGLCRSTLISCSLDCTCKIWDMSNGVLIQTVTFPYAIFGVALDSRESRFYAGGEDGLVYMGSMNREMIKKGYELFTWSKCHNGSIVSLVLVNEGRNLVSAAEDGSVWKWDVMNGEVTMVLGNNNDKRSMISDMIVATRDRNHGVVIKENDVVIGDSEINDLISSSSFSSSRLYDEEVVTNLMQITDFGQVLDVLVEDKKKAINMLESAIEMYERLLKLILKEAMRGISGSNDDEDKEKQGDKEQEEENEN 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0661 444 MobiDBLite consensus disorder prediction 421 444 - -
Lal1g0661 444 Pfam WD domain, G-beta repeat 118 151 IPR001680 GO:0005515
Lal1g0661 444 Pfam WD domain, G-beta repeat 178 215 IPR001680 GO:0005515
Lal1g0661 444 Gene3D - 2 153 IPR015943 GO:0005515
Lal1g0661 444 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 6 309 IPR011047 -
Lal1g0661 444 SMART WD40_4 264 304 IPR001680 GO:0005515
Lal1g0661 444 SMART WD40_4 174 215 IPR001680 GO:0005515
Lal1g0661 444 SMART WD40_4 218 256 IPR001680 GO:0005515
Lal1g0661 444 SMART WD40_4 116 155 IPR001680 GO:0005515
Lal1g0661 444 Gene3D - 156 384 IPR015943 GO:0005515
Lal1g0661 444 PANTHER OS09G0477800 PROTEIN 7 426 - -
Lal1g0661 444 ProSiteProfiles Trp-Asp (WD) repeats profile. 272 313 IPR001680 GO:0005515
Lal1g0661 444 PANTHER WD-REPEAT PROTEIN 18 7 426 IPR045227 -
Lal1g0661 444 Coils Coil 389 416 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0661 103 305 U-box Gene Family AT1G04510 26.887 3.50e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0661 K14829 - gmx:100785191 426.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0661 1 4324348 4326124 Lal1g0661 1 4324348 4326124 ECH