Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0634 ATGAAAAAGATCAATCTTTTATTAAGAAAGTGCAAGAGTTTGTCAAGGCAACTAGGAAGATCTTCATCATATACTAGCTTAAGGTCCAAATCTACTAAAGAAGACTTTTGGGTAGGACATGAAATAAAAGAAGATGAAAATTGTGAAACTATACTTGTTGGAAGCACAAGGAAAAGGTATGTGATTAGCACAAAGTTTCTGAATCATCCACTTCTGAATGCTCTAATAAACAAGTCAAAGCAAAAAGAGAGTGATGATGAAAATATTTTGGTGGTAAAGTGTGAGGTGGTACTCTTTGATCATCTTTTGTGGATGCTAGAAAATGCAGATCCTAACTTTAGTTCTGAATCTTTGGAGGAATTGACTGAGTTCTATGTAAAATTGATACACAAGTTTGGAGCCTTAAGTTTAGGGATGGGGATCACATATCCTCATTCATGTCTCACTTTGTGTATCAAGCCAATTAGAAAGCTTCATTCAACTAAATAG 489 0.3436 MKKINLLLRKCKSLSRQLGRSSSYTSLRSKSTKEDFWVGHEIKEDENCETILVGSTRKRYVISTKFLNHPLLNALINKSKQKESDDENILVVKCEVVLFDHLLWMLENADPNFSSESLEELTEFYVKLIHKFGALSLGMGITYPHSCLTLCIKPIRKLHSTK 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0634 162 Pfam Auxin responsive protein 38 106 IPR003676 GO:0009733
Lal1g0634 162 PANTHER EXPRESSED PROTEIN 3 126 - -
Lal1g0634 162 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 126 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0634 Lal-Chr1 4095034 4096052 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0634 50 108 Calmodulin-binding Proteins AT3G43120 35.000 2.88e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0634 - - gmx:100500162 203.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0634 1 4095034 4096052 Lal1g0634 1 4095034 4096052 ECH