Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0627 ATGGGGAAGAAACAGAAGCAGAAGATTATTCTTCCGCCGGAACTCCCGCCGGAGATTCCCGACGATGAAGTTGAGGTTTCTGACGAGGACGTTCAATTCGTGAAGGACAATCGCGGCTATGCCTCCTTGCTTTCCACCATCGACACCCAATCTATAACCAAGCATGTTACTCGAGTTGCTGATGCCAAAGAGGATACCTTGGAGAAACTCTACGAGGAACGCTCACGAAAGAGTGCTCTAAAGAAAGAGAAAGAAGAAACAGGTCTCCAGGTCGATCGTGTTGATGCTCTACCAATCAAAACCTTGGATGGAAAACTCTATTACCGGACAGCTAAGAAAGCAGAACCAGAAAATGGTCCAAGTCAAGAGGAAGCTGAAGAGGACGGTAATGCAGACAAAGGTCTAATGAAGCTAACCAAGTCTGAGAGGAGAGCCAAACTTAAGAAAATGAAAAGAGAGGAGAAAAAACAAGGGAAAGAGGTGGCTAAAACAGAAGTTCAAGAAACTCCACAAGCAGCAGTACTGGCAGAGGTAAAAGAAGATCTCACAGCTGAGGAGGCATTTGATAGTAAAAAGCGTAAACTTGCAGAGTTGGGAGATTCCTTGCTTACAGACCCCGACTCCAATATTAAATTTTTGAAGGATATGCTACAGCTATGTAAAGATAATGATCCTACCATTGTCAAACTTGGACTTCTTTCCCTCTTGGCTGTTTTCAAAGATATTGTCCCTGGCTATCGAATTAGGCTTCCCACTGAAAAGGAAATGGAAATGAAGGTTTCAAAGACTGTTAGAAAGATGCGTTATTATGAATCGACTCTTCTTTCTGCATACAAGGGGTACCTGCAAAGGCTGATGATATTAGAAAAGAAGCCCTTATTTCAACATGTTGTAGTTCGTTGTATTTGTAGTTTGCTTGATGCAAATCCCCATTTCAACTTTCGTGAAAGCTTGTTGGATTCCACTGTCAGGAACATAAACTCCACAAATGAGGCCATAAGGAAACTTTGTTGTTCTACAATCAAGTCCCTATTTACAAATGAGGGTAAACATGGTGGTGAAGCTACTGTGGAGGCTGTTCGTTTGATTGCTGATCATGTTAAGGCTTATAATTGCCAAATGCAACCTGATTCTGTTGAGGTTTTTTTGTCTCTTTCATTTTATGATGATCTCGGGAAGCCTGAAAAGGCAGACGAGGATCAGAAAAATAAATACAAGAAAAATAAGAAGAGAAAAAACTCTGAGGCATCAAATCAGTTGCCGGAGAATGACAGAAAGAAAAGTAGGAGAGAGTTGATCTCTAAGACAAGAGAGGAGGTTGAAGCTGATTACAAAGCTGCATCGTTTACACCAGATGTTATGGAGCAGAGACAGATGCAAACTGAAACACTCTCTGCCGTGTTTGAGACATACTTTCGCATTTTGAAGCATACGATGCAGTCCATAGTCGCTAGGCCTCCTGAAGCAAATTCTGGTGCATTATCCACTGCAGTTGAGCCCCACCCATTACTTGCTCCTTGTCTTAAAGGGCTGGGAAAATTTGCACACCTGATTGACCTTGATTTCATGGGTGATCTAATGAAGCATCTGAAAATTCTTGCTTCTGGCAGTAGCAACCCAGGGAGCACTTCTGAGAACGGTTCTAAATGTTTGACTGTGTCAGAACGTCTCCAATGCTGCATTGTTGCTTTTAAAGTGATGAGGAACAATCTTGAAGCCTTGAATGTTGATTTACAGGACTTCTTTGTCCATCTTTACAATCTTATAGTTGAATACAGGCCAGGAAGAGATCAAGGAGAGGTGTTAGCAGAAGCTCTGAAGATAATGTTGTGTGACGATAAGCAGCATGACATGCAAAAGACGGCCGCATTTATAAAACGTTTGGCTACATTGTCATTGTGCTTTGGATCTCCAGAGTCCATGGCTGCCTTGGTCACAGTAAAGCATCTTCTTCAGAAAAATGTTAAATGCAGAAATCTGTTGGAAAATGACACTGGAGGTGGATCAGTTGCTGGCACAATTCCAAAATATCTGCCATATTCCACAGACCCCAATTTAAGTGGTGCCCTTGCCACAGTACTTTGGGAACTGAATCTTTTGTCCAAACATTATCATCCAACTATATCTACAATAGCCTCAGGCATTACAACCATGAGTGCTGCAAATAACCAACTCCTTCTCTCTAAATCCTCTCCTCAACAAGCTTTTAAGGACCTTTCTCTTGAACAGGAATTATCTTTCCCACAAATTGGTAACATAAAGTTAAATAACAAGAAGAGAAAAACAAATATATCTGCTACATCACCTTCCACTGGTTCTACAACAGTTATGAGTTCCTTCAATGAGGATGAGTTGCAAAAGAAGCTTAGTTCCCATTTTATGATTCTTCATGACATCAAGGAGAATGAAAGATTGAGAAGTGAGTTGGATAGGACTACACAATCTCTTATGCTATATGAACAATACAAGAAACAAAAGAAGCAACATTCAAAACCAAGAAGTAAATTATCAACTGTTGCTTAG 2523 0.4094 MGKKQKQKIILPPELPPEIPDDEVEVSDEDVQFVKDNRGYASLLSTIDTQSITKHVTRVADAKEDTLEKLYEERSRKSALKKEKEETGLQVDRVDALPIKTLDGKLYYRTAKKAEPENGPSQEEAEEDGNADKGLMKLTKSERRAKLKKMKREEKKQGKEVAKTEVQETPQAAVLAEVKEDLTAEEAFDSKKRKLAELGDSLLTDPDSNIKFLKDMLQLCKDNDPTIVKLGLLSLLAVFKDIVPGYRIRLPTEKEMEMKVSKTVRKMRYYESTLLSAYKGYLQRLMILEKKPLFQHVVVRCICSLLDANPHFNFRESLLDSTVRNINSTNEAIRKLCCSTIKSLFTNEGKHGGEATVEAVRLIADHVKAYNCQMQPDSVEVFLSLSFYDDLGKPEKADEDQKNKYKKNKKRKNSEASNQLPENDRKKSRRELISKTREEVEADYKAASFTPDVMEQRQMQTETLSAVFETYFRILKHTMQSIVARPPEANSGALSTAVEPHPLLAPCLKGLGKFAHLIDLDFMGDLMKHLKILASGSSNPGSTSENGSKCLTVSERLQCCIVAFKVMRNNLEALNVDLQDFFVHLYNLIVEYRPGRDQGEVLAEALKIMLCDDKQHDMQKTAAFIKRLATLSLCFGSPESMAALVTVKHLLQKNVKCRNLLENDTGGGSVAGTIPKYLPYSTDPNLSGALATVLWELNLLSKHYHPTISTIASGITTMSAANNQLLLSKSSPQQAFKDLSLEQELSFPQIGNIKLNNKKRKTNISATSPSTGSTTVMSSFNEDELQKKLSSHFMILHDIKENERLRSELDRTTQSLMLYEQYKKQKKQHSKPRSKLSTVA 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0627 840 Coils Coil 67 87 - -
Lal1g0627 840 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 3 783 IPR016903 -
Lal1g0627 840 MobiDBLite consensus disorder prediction 107 141 - -
Lal1g0627 840 PIRSF Noc3 1 814 IPR016903 -
Lal1g0627 840 Pfam CBF/Mak21 family 557 712 IPR005612 -
Lal1g0627 840 Pfam Nucleolar complex-associated protein 191 281 IPR011501 -
Lal1g0627 840 MobiDBLite consensus disorder prediction 1 22 - -
Lal1g0627 840 MobiDBLite consensus disorder prediction 412 430 - -
Lal1g0627 840 Coils Coil 147 167 - -
Lal1g0627 840 MobiDBLite consensus disorder prediction 107 165 - -
Lal1g0627 840 MobiDBLite consensus disorder prediction 394 430 - -
Lal1g0627 840 SUPERFAMILY ARM repeat 208 633 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0627 Lal-Chr1 4025096 4034156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0627 1 809 Core DNA Replication Machinery Family AT1G79150 58.752 0.0 918
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0627 K14834 - gmx:100776136 1273.84