Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0612 ATGCCTGGGAATAAGTATAACGGTCATTTGAATAATCATATTCCAGGTCGTGTTGAACGACTTTTAAGAAATAGAGAGTTAAGAAAAAGCAGTAGGGAGAGCTATTTGAATGAGAATGAGCAGCGGTTAAGAGAAGACGATGATTTTTATGATGGTGATGAATGTTTTATTGATGGGGCTAAAGCAGCAAGGATGCTTGCTGAGATGTGTCAAAGGCAAGGTGTTAAACAAAGACTTCTAGTGGTGGCTAATAGGCTGCCCGTCTCGGCAGTTCGGAAAGGTGAGGATTCTTGGTCTTTGGAGATAAGTGCAGGTGGCCTGGTGAGTGCACTTTTAGGTGTAAAGGAGTTTGAGACAAGGTGGATTGGTTGGGCCGGTGTTAATGTGCCAGATGAGGTTGGACAGGAGGCACTTACTAAAGCATTGGCTGAAAAGAGGTGCATCCCTGTATTTTTGGATGAAGAAATTGTTCATCAATATTATAATGGTTATTGCAACAACATCTTGTGGCCCCTTTTCCATTACCTTGGACTTCCACAAGAAGACCGGCTTGCCACCACACGTAGTTTCCAGTCTCAGTTTGCGGCATATGAGAAAGCAAATCAAATGTTTGCTGATGTTGTGAATGAGCACTATGAAGAGGGTGATGTTGTTTGGTGCCATGATTACCATCTCATGTTTCTTCCAAAATGCTTAAAGAAATATAACAGCAACATGAAAGTTGGATGGTTTCTCCACACCCCATTTCCATCTTCTGAAATTCATAGGACACTGCCTTCTCGTTCAGAACTCCTGCATTCTGTTCTTGCAGCCGATTTAGTTGGTTTTCACACCTACGATTATGCACGGCATTTTGTTAGTGCTTGTACTCGTATCCTTGGACTTGAGGGTACACCTGATGGGGTTGAGTATCAAGGGAAGCTGACTCGAGTTGCTGCATTTCCAATTGGGATAGATTCGGAACGATTTATACGTGCACTTGACCTTCCTCCAGTCCAGGATCACGTCAAAGATTTACAAGAAAGATTTAAGGGCAGAAAGGTAATGTTAGGTGTTGATCGCCTTGATATGATTAAAGGAATCCCTCAGAAACTTCTAGCGTTTGAAAAATTCTTGGAAGAGAATGTTTATTGGCGTGATAAAGTTGTTTTGCTTCAGATCGCTGTGCCAACAAGAACAGATGTTCCTGAGTATCAAAAGCTTACAAGCCAGGTTCATGAAATTGTTGGTCGCATCAATGGCAGATTCGGAACATTGACTGCTGTTCCTATACATCATCTGGATCGCTCCCTTGACTTTCATGCACTATGTGCATTGTATGCTGTTACTGACGTAGCACTGGTTACGTCCTTGAGGGATGGAATGAATCTTGTCAGCTATGAATTTGTGGCATGCCAGGAGAAAAAGAAAGGGGTTCTCATTCTCAGTGAATTTGCTGGCGCAGCACAATCTCTCGGTGCCGGGGCAATTCTAGTAAACCCATGGAACATCACAGAAGTTGCTGATGCAATTGGCAAGGCTCTAAATATGCCATCTGCTGAAAGAGAAAAGAGACATAAGCATAATTTTCTTCATGTAAAATCTCATACTGCTCAGGAATGGGCTGCAACTTTTGTAAGCGAACTAAATGATACTGTTATAGAGGCACAACTAAGAACAAGGCAAGTTCCACCCCGGCTTCCAACCAAGACAGCAATTGAACATTATCTGCAGTCAACTAATCGATTGGTCATTTTGGGTTTCAATGGAACATTAACTGAACCAGTCGAAAAAACAGGTGATCAGATTAAAGAAATGGAACTCAAGGTGCATCCACTATTGAAACAACCCTTGACAGCCCTTTGCGGTGATCCAAATACCACAGTTGTTGTGCTCAGTGGAAGTGGCAGAAAAGTCTTAGATGAAAACTTCGAAGAATATGGGATGTGGCTAGCAGCAGAGAATGGAATGTTTTTACATCCCTCAATGGGAGAATGGATGACGACAATGCCAGAGCATCTGACTATGGAATGGGTTGACAGTGTGAAGCATGTTTTTGAGTACTTCACAGAAAGAACACCCAGATCACATTTTGATTTCGAAGAAAGGGAAACTTCACTCGTATGGAATTACAAATATTCAGATGTTGAGTTCGGAAGACTTCAAGCACGGGACATGCTGCAACATCTTTGGGCAGGTCCAATTTCTAATGCTTCAGTTGATGTTGTTCACGGGAGTCGATGTATTGAGGTCCGAGCTGTTGGTGTCACAAAGGGAGCAGCTATTGATCGAATCCTGGGTGAGATAGTCCACAGTAAATCCATGACATCACCAATTGATTATGTTCTGTGTATAGGACATTTTCTGGGGAAGGATGAAGATATTTACGCCTTTTTTGAGCCAGATCTTCCTTCTATTGGCGTGTATCATCCGCGAACTAAGGTAACAGATGGAGTAAAGTATCCTACTGAAAGGAAACCCTCATTGAAGACCTCAAATATTAAAAGTGGGCCAAAGTCATCACAAAACAAGGCACAAAAGCCAGTGTCAAATTCTGAGAAGAAAACAAGCAATCATGTATGCAATAACACACCAAGAAGGCCAACTCCAGAAAGGGTATCATGGAATGTGCTTGATCTTAAGAAAGAGAATTACTTTTCTTGTGCTGTCGGGCGAAATCGAACGAATGCTAGGTATACACTTGGATCATCAGATGATGTAGTTGCATTTCTGATGGAACTAGTGGATGCATCTTCCAACTCTTCACAATTGAGTTAG 2757 0.4215 MPGNKYNGHLNNHIPGRVERLLRNRELRKSSRESYLNENEQRLREDDDFYDGDECFIDGAKAARMLAEMCQRQGVKQRLLVVANRLPVSAVRKGEDSWSLEISAGGLVSALLGVKEFETRWIGWAGVNVPDEVGQEALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYEKANQMFADVVNEHYEEGDVVWCHDYHLMFLPKCLKKYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLHSVLAADLVGFHTYDYARHFVSACTRILGLEGTPDGVEYQGKLTRVAAFPIGIDSERFIRALDLPPVQDHVKDLQERFKGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENVYWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQEKKKGVLILSEFAGAAQSLGAGAILVNPWNITEVADAIGKALNMPSAEREKRHKHNFLHVKSHTAQEWAATFVSELNDTVIEAQLRTRQVPPRLPTKTAIEHYLQSTNRLVILGFNGTLTEPVEKTGDQIKEMELKVHPLLKQPLTALCGDPNTTVVVLSGSGRKVLDENFEEYGMWLAAENGMFLHPSMGEWMTTMPEHLTMEWVDSVKHVFEYFTERTPRSHFDFEERETSLVWNYKYSDVEFGRLQARDMLQHLWAGPISNASVDVVHGSRCIEVRAVGVTKGAAIDRILGEIVHSKSMTSPIDYVLCIGHFLGKDEDIYAFFEPDLPSIGVYHPRTKVTDGVKYPTERKPSLKTSNIKSGPKSSQNKAQKPVSNSEKKTSNHVCNNTPRRPTPERVSWNVLDLKKENYFSCAVGRNRTNARYTLGSSDDVVAFLMELVDASSNSSQLS 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0612 918 MobiDBLite consensus disorder prediction 811 866 - -
Lal1g0612 918 Pfam Glycosyltransferase family 20 78 543 IPR001830 GO:0003824|GO:0005992
Lal1g0612 918 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 27 907 - -
Lal1g0612 918 Gene3D - 578 780 IPR023214 -
Lal1g0612 918 SUPERFAMILY HAD-like 575 907 IPR036412 -
Lal1g0612 918 Pfam Trehalose-phosphatase 581 796 IPR003337 GO:0003824|GO:0005992
Lal1g0612 918 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 27 907 IPR001830 GO:0003824|GO:0005992
Lal1g0612 918 CDD HAD_TPP 576 795 - -
Lal1g0612 918 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 78 543 IPR012766 GO:0003825|GO:0005992
Lal1g0612 918 Gene3D Glycogen Phosphorylase B; 70 324 - -
Lal1g0612 918 CDD GT20_TPS 78 543 IPR001830 GO:0003824|GO:0005992
Lal1g0612 918 Gene3D - 665 747 - -
Lal1g0612 918 MobiDBLite consensus disorder prediction 819 863 - -
Lal1g0612 918 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 77 545 - -
Lal1g0612 918 Gene3D Glycogen Phosphorylase B; 325 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0612 Lal-Chr1 3900666 3911020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0612 1 913 Trehalose Biosynthesis Gene Families AT1G78580 76.956 0.0 1450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0612 K16055 - gmx:100797320 1579.69