Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0611 ATGGCACTGCTATGTGGTTCAACTTCTTTGACCTTCCCTTCAACTTCTCTCTCTTCTCAATTCAAGAATGTTACTTCTAAATCTTCTTCCTTTTCCACCTTCAATTTCTCACTACCAAACCTTTCATTATCATCATCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCACTTTCTTATTCTTTTCAGACCCATTTCCCTTCCACAATTTTCACTATCCATTCCAAGCTTCAGGAACAAGAACCAGAACTAGAGCTGGAACAGGAAGAAGAAGAAGAAGAAATAGAAACAGATCCACGTTTCATGTGCGTCGAACCCGAACCTCGATTCAGTGGCCCGGACATTTGGAACACAACCTGGTATCCAAAAGCTGCAGATCATGTGAATACAGATAAAACATGGTATGTTGTTGATGCTACAGACAAAGTTCTTGGAAGGTTGGCATCAACCATTGCTATTCATATCAGAGGAAAAAATCTTGCAACCTTTACTCCCAGTGTTGACATGGGTGCATTTGTAATTGTGGTGAATGCAGAAAAGGTTGCTGTATCTGGGAAAAAGAGAACCCAGAAGGTTTACCGGAGGCACTCTGGACGACCAGGTGGCATGACAGTAGAGACATTTGCCCAACTGCAGAACAGGATTCCGGAAAGAATTATTGAGCATGCTGTCCGTGGCATGCTTCCTAAAGGAAGGCTTGGCAGAAGACTCTTCACCCACCTGAAGGTCTACAAGGGTCCAGAGCATCCTCATGCGGCACAGAAACCCATTGATTTGCCTATAAAGGATAAGAGAATACAGTTGGTGAGATAG 813 0.428 MALLCGSTSLTFPSTSLSSQFKNVTSKSSSFSTFNFSLPNLSLSSSSSSSSSSSSSSLSYSFQTHFPSTIFTIHSKLQEQEPELELEQEEEEEEIETDPRFMCVEPEPRFSGPDIWNTTWYPKAADHVNTDKTWYVVDATDKVLGRLASTIAIHIRGKNLATFTPSVDMGAFVIVVNAEKVAVSGKKRTQKVYRRHSGRPGGMTVETFAQLQNRIPERIIEHAVRGMLPKGRLGRRLFTHLKVYKGPEHPHAAQKPIDLPIKDKRIQLVR 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0611 270 Gene3D Ribosomal protein L13 123 267 IPR036899 GO:0003735|GO:0005840|GO:0006412
Lal1g0611 270 TIGRFAM rplM_bact: ribosomal protein uL13 128 259 IPR005823 GO:0003735|GO:0005840|GO:0006412
Lal1g0611 270 Pfam Ribosomal protein L13 132 250 IPR005822 GO:0003735|GO:0005840|GO:0006412
Lal1g0611 270 Coils Coil 74 94 - -
Lal1g0611 270 PANTHER RIBOSOMAL PROTEIN L13 91 268 IPR005822 GO:0003735|GO:0005840|GO:0006412
Lal1g0611 270 PANTHER 50S RIBOSOMAL PROTEIN L13, CHLOROPLASTIC-LIKE 91 268 - -
Lal1g0611 270 ProSitePatterns Ribosomal protein L13 signature. 224 246 IPR023563 GO:0003735|GO:0005840|GO:0006412
Lal1g0611 270 CDD Ribosomal_L13 134 247 IPR005822 GO:0003735|GO:0005840|GO:0006412
Lal1g0611 270 Hamap 50S ribosomal protein L13 [rplM]. 134 258 IPR005822 GO:0003735|GO:0005840|GO:0006412
Lal1g0611 270 SUPERFAMILY Ribosomal protein L13 128 262 IPR036899 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0611 136 267 Cytoplasmic Ribosomal Protein Gene Family AT3G07110 31.852 1.40e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0611 K02871 - gmx:100305981 338.961