Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0590 ATGGAAGTAAAATTGAATGGCAGGAACAACTTTTGGAAGAAGCAACAAGTATCAGAATTGTGGCAGTGGCAGAAGCAGCAACAGGAACTACAAGCAGAAAAAGAGAGTGAAAGTGGGAAGAACCAAACTAGGTTGGAGTTTAAAGAAAAAAGAACAACAACAACACTGCACCATGTAGGAGAAGAAAGAGAAGACGAAGAAGACCAAGATTCCTCTCACCAAAACCAAGACTCAACCTTTCAATATCTTCAACAACCCCATCAACAACAATCTCATGTAGCTTTGAACATAAACTCGCTATCCCCACTTCTAAAAAAACGATCTTTTCATCTTCCACCGCCTCACCCTCTTCTTCTATCATCACCACCTTCCACAGTCAAACATGGAACAAGAGGGATGAGGAGTACTACCACTACCGGAGTTGGAGAAATCGTAGAAGTACAAGGCGGTCACATTGTACGGTCCACCGGGCGAAAGGACCGACACAGCAAAGTATGCACCGCAAAGGGAACCAGAGACCGACGAGTTCGTCTCTCAGCCCACACCGCCATTCAATTCTACGACGTCCAAGACCGCCTCGGCTACGACCGCCCCAGCAAGGCGGTCGATTGGCTCATAAAAAAAGCCAAAGCCGCCATCGACCAGCTCGCCGAGCTCCCAGCTTGGAACCCGACCGCCGCAATCGAACAGCAACAGCAGCAGATAAACGAAATCCTCCGCCGCGAACCCGCCGCGGAGGATGGACTAATTACTGATTCTAGTTGCTGTAATGGGAGTGGAAGAATGTCAGAAGAATTTCAACAACAGCAATTTGGTGCTGAGAATAACAACAATGATAATAATAATAATAACAGTAACAAATACAACAGTGCTGGTTCTGGTTTTCTTCCACCATCTATGGATACTGAAATTGCTGATACAATTAAGTCCTTTTTTCCTATGGTAGCTGCTGCGGAAACAACGACGTCGTTTCACAATTATTCTACACCGCCGGATTTGTTGTCAAGAACGACAACCACTGCTGGTAATCACAACCACCAGCAAGATCTACGGCTATCGTTGCAATCGTTTCAAGACCCCATTCTGCTCCACCATCAACAACAACAACAACAGAATCAGACTCAGAACCAGAATCAGCAAGTGTTGTTCAATGGAATTAGCACGCTTGGGTTTGATGGTGCTGGTTCTTCAGGGTGGTCAGAACAACACCACCAACATGAACATGAACATGAACATGAGCATGAGCATGGTCGGTTTCATAGAATGGTGGCTTGGAACGCTTCTGCTTCAGATGATAGTAACAGTAGCCATGGTGGTGGATTTCTCTTTAACTCGCCGCCGCCGTACACAGTGGCGTCAGCGGCGATGTTTGGCCATCATGGCCAGTATTTTTCTCAGAGGGGACCCCTTCAGTCCAGTAACACTCCTTCGATTCGTGCTTGGATAGACTCGAATTCCTTGGCTGCGGCGACAACTGTCGCCGCCGTCTCTCACCCCCATTATCACCATCACTATCTCTCGCCGGCGATCCATCAGGCTTCTGCCTCCGGATTTGCATCACCTTACGGTGGCTTCTCCGGCTTCCGCATACCAGCACGAATTCAGGGTGAAGAGGAACACGACGGCGTTTCAGACAAGCCGTCCTCTGCTTCCTCTGATTCTCGTCATTGA 1671 0.4794 MEVKLNGRNNFWKKQQVSELWQWQKQQQELQAEKESESGKNQTRLEFKEKRTTTTLHHVGEEREDEEDQDSSHQNQDSTFQYLQQPHQQQSHVALNINSLSPLLKKRSFHLPPPHPLLLSSPPSTVKHGTRGMRSTTTTGVGEIVEVQGGHIVRSTGRKDRHSKVCTAKGTRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDQLAELPAWNPTAAIEQQQQQINEILRREPAAEDGLITDSSCCNGSGRMSEEFQQQQFGAENNNNDNNNNNSNKYNSAGSGFLPPSMDTEIADTIKSFFPMVAAAETTTSFHNYSTPPDLLSRTTTTAGNHNHQQDLRLSLQSFQDPILLHHQQQQQQNQTQNQNQQVLFNGISTLGFDGAGSSGWSEQHHQHEHEHEHEHEHGRFHRMVAWNASASDDSNSSHGGGFLFNSPPPYTVASAAMFGHHGQYFSQRGPLQSSNTPSIRAWIDSNSLAAATTVAAVSHPHYHHHYLSPAIHQASASGFASPYGGFSGFRIPARIQGEEEHDGVSDKPSSASSDSRH 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0590 556 MobiDBLite consensus disorder prediction 30 77 - -
Lal1g0590 556 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 133 556 IPR005333 GO:0003700
Lal1g0590 556 PANTHER TRANSCRIPTION FACTOR TCP4 133 556 - -
Lal1g0590 556 MobiDBLite consensus disorder prediction 394 416 - -
Lal1g0590 556 MobiDBLite consensus disorder prediction 30 73 - -
Lal1g0590 556 ProSiteProfiles TCP domain profile. 158 216 IPR017887 -
Lal1g0590 556 MobiDBLite consensus disorder prediction 273 294 - -
Lal1g0590 556 MobiDBLite consensus disorder prediction 533 556 - -
Lal1g0590 556 Pfam TCP family transcription factor 157 284 IPR017887 -
Lal1g0590 556 MobiDBLite consensus disorder prediction 401 416 - -
Lal1g0590 556 MobiDBLite consensus disorder prediction 115 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0590 Lal-Chr1 3768807 3770602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0590 109 556 TCP Transcription Factor Family AT3G15030 47.992 7.07e-106 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lal1g0590 TCP 3.9e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0590 - - aip:107630075 444.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0749 8 5381320 5382384 Lal1g0590 1 3768807 3770602 ECH
Lal1g0590 1 3768807 3770602 Lal1g0590 1 3768807 3770602 ECH