Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0562 CCCAAGTCAGTGAAGAAAGAAGAAACCATGGAGAGTACCGAATCATGTATTGATTCAAAGAAACCGAACCTTCCAGCAGGGTTCCGATTCCACCCCACAGATGAAGAGCTCGTGGTTCACTACCTCAAGAAGAAGGTTTCCTCTGATCCTCTCCCTGCAACTATAATCGCCGATATTGATCTCTATAAGTTCGATCCTTGGGAACTACCAGCTAAGGCATCGTTTGGGGAACAAGAGTGGTATTTTTTTAGCCCAAGGGATAGGAAGTACCCGAACGGAGCAAGACCAAACAGGGCTGCAACTTCTGGGTATTGGAAGGCCACAGGGATTGATAAATCTGTGTTGTCATCTAGTGGGGCCCAGAAGGTTGGAGTGAAGAAAGCTTTGGTTTTCTATGGTGGAAAGCCACCAAAAGGGATCAAGACCAATTGGATCATGCATGAGTATCGTATTGCTGATAACAAACCTACCAATAATAAGCCTCCTGGCTATGACTTAGGCAACAAGAAAAATTCTCTTAGGCTGGATGATTGGGTGCTATGCAGAATATACAAGAAGAGTAATACACAGAGGTCATCTATGGAGCATGATAGGGATAATTCCATGGATGACATGATTGGAGGGCTATCTACATCCATGAACGTGGGCCACATGAATATGAGGTTTCACCTTTCAAAAATGGCCACAAGCTACAGTGGTAGTACTAGTGGTGCATTGTTGGAAAATGACCAAAACTTGTTGGAAGGATTGATGTTAGGAAATGGTGGGTTGAGCACAACAACAATTACAAGTGCTATATCATCATCTCATTTGGAAACCTCAAACTCCAAAAGAACACTTCCATCACTGTATTGGAATGATCATGCTGAAGATGTCGATGGAACCACATTTTCTAACAAAAGGTTCAATTTTATGGACAATGGCACTGAGAATGGCAATGTTGTGATGAGGACTGAAGATAATAATGGCACTTCTGCTAGCTCTATTGCCACCCTGCTTAACCATCTCCCACAACAAACACCTAATTCGCTGCACCAACAACAGAAAATGCTGGGATCTATAGGAGATGGGCTATTTCGGTCACCATATCAAATACAAGGGATGAATTGGTATGGCTAG 1119 0.4307 PKSVKKEETMESTESCIDSKKPNLPAGFRFHPTDEELVVHYLKKKVSSDPLPATIIADIDLYKFDPWELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGIDKSVLSSSGAQKVGVKKALVFYGGKPPKGIKTNWIMHEYRIADNKPTNNKPPGYDLGNKKNSLRLDDWVLCRIYKKSNTQRSSMEHDRDNSMDDMIGGLSTSMNVGHMNMRFHLSKMATSYSGSTSGALLENDQNLLEGLMLGNGGLSTTTITSAISSSHLETSNSKRTLPSLYWNDHAEDVDGTTFSNKRFNFMDNGTENGNVVMRTEDNNGTSASSIATLLNHLPQQTPNSLHQQQKMLGSIGDGLFRSPYQIQGMNWYG 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0562 372 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 10 344 - -
Lal1g0562 372 MobiDBLite consensus disorder prediction 1 15 - -
Lal1g0562 372 Pfam No apical meristem (NAM) protein 25 151 IPR003441 GO:0003677|GO:0006355
Lal1g0562 372 Gene3D NAC domain 33 191 IPR036093 GO:0003677|GO:0006355
Lal1g0562 372 MobiDBLite consensus disorder prediction 1 22 - -
Lal1g0562 372 ProSiteProfiles NAC domain profile. 24 186 IPR003441 GO:0003677|GO:0006355
Lal1g0562 372 PANTHER NAC TRANSCRIPTION FACTOR 56 10 344 - -
Lal1g0562 372 SUPERFAMILY NAC domain 20 186 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0562 Lal-Chr1 3625174 3627351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0562 28 371 NAC Transcription Factor Family AT3G15510 51.913 1.97e-116 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal1g0562 NAM 5.3e-39 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0562 1 3625174 3627351 Lal1g0562 1 3625174 3627351 ECH